RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 MRGPRFQ96AM1 343 aa17.57■□□□□ 0.4
LSM4-202ENST00000593564 PINX1Q96BK5 328 aaKnown RBP17.57■□□□□ 0.4
LSM4-202ENST00000593564 RARRES2Q99969 163 aa17.57■□□□□ 0.4
LSM4-202ENST00000593564 GINS3Q9BRX5 216 aa17.57■□□□□ 0.4
LSM4-202ENST00000593564 VPS13DQ5THJ4 4388 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 IGKV3-7A0A075B6H7 116 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 IGHV3OR16-13A0A075B7E8 117 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 IGHV3-74A0A0B4J1X5 117 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 IGHV3-48P01763 117 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 PAFAH1B2P68402 229 aa17.56■□□□□ 0.4
LSM4-202ENST00000593564 ERHP84090 104 aaKnown RBP17.56■□□□□ 0.4
LSM4-202ENST00000593564 SMIM31A0A1B0GVY4 71 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 APOA1P02647 267 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 RCVRNP35243 200 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 LGALS9CQ6DKI2 356 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 TOMM20LQ6UXN7 152 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 TCF24Q7RTU0 167 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 GBGT1Q8N5D6 347 aa17.55■□□□□ 0.4
LSM4-202ENST00000593564 RPP25LQ8N5L8 163 aaKnown RBP17.55■□□□□ 0.4
LSM4-202ENST00000593564 C11orf68Q9H3H3 251 aaKnown RBP17.55■□□□□ 0.4
LSM4-202ENST00000593564 MFFQ9GZY8 342 aa17.54■□□□□ 0.4
LSM4-202ENST00000593564 VSIRQ9H7M9 311 aa17.54■□□□□ 0.4
LSM4-202ENST00000593564 VCX3AQ9NNX9 186 aa17.54■□□□□ 0.4
LSM4-202ENST00000593564 COMMD3Q9UBI1 195 aa17.54■□□□□ 0.4
LSM4-202ENST00000593564 NPBWR1P48145 328 aa17.53■□□□□ 0.4
LSM4-202ENST00000593564 SNX29P2Q8IUI4 249 aa17.53■□□□□ 0.4
LSM4-202ENST00000593564 DUSP18Q8NEJ0 188 aa17.53■□□□□ 0.4
LSM4-202ENST00000593564 OR11H2Q8NH07 326 aa17.53■□□□□ 0.4
LSM4-202ENST00000593564 ST8SIA2Q92186 375 aa17.53■□□□□ 0.4
LSM4-202ENST00000593564 RND3P61587 244 aa17.52■□□□□ 0.4
LSM4-202ENST00000593564 C11orf45Q8TAV5 145 aa17.52■□□□□ 0.4
LSM4-202ENST00000593564 HERC2O95714 4834 aa17.52■□□□□ 0.39
LSM4-202ENST00000593564 A0A087WXM4 84 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 TRAV2A0A0B4J234 112 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 INS-IGF2F8WCM5 200 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 ST8SIA3O43173 380 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 DEDDO75618 318 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 DFFBO76075 338 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 APOHP02749 345 aaPredicted RBP17.51■□□□□ 0.39
LSM4-202ENST00000593564 NANOS2P60321 138 aaKnown RBP17.51■□□□□ 0.39
LSM4-202ENST00000593564 ZNF600Q6ZNG1 722 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 LILRB2Q8N423 598 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 MS4A6AQ9H2W1 248 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 ZFAND3Q9H8U3 227 aa17.51■□□□□ 0.39
LSM4-202ENST00000593564 PUS1Q9Y606 427 aaKnown RBP eCLIP17.51■□□□□ 0.39
LSM4-202ENST00000593564 CA1P00915 261 aaPredicted RBP17.5■□□□□ 0.39
LSM4-202ENST00000593564 P0C879 139 aa17.5■□□□□ 0.39
LSM4-202ENST00000593564 SNCAP37840 140 aa17.5■□□□□ 0.39
LSM4-202ENST00000593564 RBMS2Q15434 407 aaKnown RBP17.5■□□□□ 0.39
LSM4-202ENST00000593564 IZUMO4Q1ZYL8 232 aa17.5■□□□□ 0.39
LSM4-202ENST00000593564 SPINK9Q5DT21 86 aa17.5■□□□□ 0.39
LSM4-202ENST00000593564 PVRIGQ6DKI7 326 aa17.5■□□□□ 0.39
LSM4-202ENST00000593564 M0QYG6 137 aa17.49■□□□□ 0.39
LSM4-202ENST00000593564 DNASE2O00115 360 aaPredicted RBP17.49■□□□□ 0.39
LSM4-202ENST00000593564 IGKV1-5P01602 117 aa17.49■□□□□ 0.39
LSM4-202ENST00000593564 ELK1P19419 428 aa17.49■□□□□ 0.39
LSM4-202ENST00000593564 SLC35G3Q8N808 338 aa17.49■□□□□ 0.39
LSM4-202ENST00000593564 ZNF486Q96H40 463 aaPredicted RBP17.49■□□□□ 0.39
LSM4-202ENST00000593564 FBXL17Q9UF56 701 aa17.49■□□□□ 0.39
LSM4-202ENST00000593564 A0A0B4J293 547 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 TMEM50AO95807 157 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 IFNA4P05014 189 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 DEFB131AP59861 70 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 NCS1P62166 190 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 TMEM187Q14656 261 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 LEMD1Q68G75 181 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 LHFPL1Q86WI0 220 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 TMEM231Q9H6L2 316 aa17.48■□□□□ 0.39
LSM4-202ENST00000593564 IGHV3-66A0A0C4DH42 116 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 A0A1B0GU03 582 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 CORTO00230 105 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 PGAM2P15259 253 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 AKR1C2P52895 323 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 PIGPP57054 158 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 RPL11P62913 178 aaKnown RBP17.47■□□□□ 0.39
LSM4-202ENST00000593564 TP53RKQ96S44 253 aa17.47■□□□□ 0.39
LSM4-202ENST00000593564 DNAH6Q9C0G6 4158 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 HPGDSO60760 199 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 ATG12O94817 140 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 IFNA17P01571 189 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 PI3P19957 117 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 SUB1P53999 127 aaKnown RBP eCLIP17.46■□□□□ 0.39
LSM4-202ENST00000593564 FAM24BQ8N5W8 94 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 FUNDC2Q9BWH2 189 aa17.46■□□□□ 0.39
LSM4-202ENST00000593564 TNFAIP8O95379 198 aa17.45■□□□□ 0.38
LSM4-202ENST00000593564 RNASE2P10153 161 aaKnown RBP17.45■□□□□ 0.38
LSM4-202ENST00000593564 VBP1P61758 197 aa17.45■□□□□ 0.38
LSM4-202ENST00000593564 RNASE10Q5GAN6 216 aaKnown RBP17.45■□□□□ 0.38
LSM4-202ENST00000593564 ARRDC1Q8N5I2 433 aa17.45■□□□□ 0.38
LSM4-202ENST00000593564 PDCD10Q9BUL8 212 aa17.45■□□□□ 0.38
LSM4-202ENST00000593564 C3orf85A0A1B0GTC6 90 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 A0A1W2PS18 150 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 DEFB4AO15263 64 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 NPPCP23582 126 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 TCTAP57738 103 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 STHQ8IWL8 128 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 C2CD4CQ8TF44 421 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 KLK11Q9UBX7 282 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 RABAC1Q9UI14 185 aa17.44■□□□□ 0.38
LSM4-202ENST00000593564 CLN5O75503 358 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms