RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 DUX3Q96PT4 197 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 ZC4H2Q9NQZ6 224 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 MBD2Q9UBB5 411 aa7.48□□□□□ -1.21
DDX39A-220ENST00000593008 PAIP2BQ9ULR5 123 aaKnown RBP7.48□□□□□ -1.21
DDX39A-220ENST00000593008 F11RQ9Y624 299 aaKnown RBP7.48□□□□□ -1.21
DDX39A-220ENST00000593008 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 FAM24AA6NFZ4 105 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 TRGV3P03979 118 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 NPY1RP25929 384 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 BCAP31P51572 246 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 ARL16Q0P5N6 197 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 SPANXN5Q5MJ07 72 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 HSD17B13Q7Z5P4 300 aaPredicted RBP7.47□□□□□ -1.21
DDX39A-220ENST00000593008 PINX1Q96BK5 328 aaKnown RBP7.47□□□□□ -1.21
DDX39A-220ENST00000593008 ST6GAL2Q96JF0 529 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 RNF126Q9BV68 326 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 NMES1Q9C002 83 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 FNDC4Q9H6D8 234 aaPredicted RBP7.47□□□□□ -1.21
DDX39A-220ENST00000593008 ENY2Q9NPA8 101 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 ZNF580Q9UK33 172 aa7.47□□□□□ -1.21
DDX39A-220ENST00000593008 FAM90A26D6RGX4 464 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 G3V4G9 280 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 K7EIM0 57 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 WIPF1O43516 503 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 MPC2O95563 127 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 IFNA10P01566 189 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 GIPP09681 153 aaPredicted RBP7.46□□□□□ -1.22
DDX39A-220ENST00000593008 METTL15P1P0C7V9 234 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 DEFA4P12838 97 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 RAB9AP51151 201 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 FOXE3Q13461 319 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 SLC25A24Q6NUK1 477 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 TEX38Q6PEX7 206 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 TMEM65Q6PI78 240 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 ZNF114Q8NC26 417 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 OR4F17Q8NGA8 305 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 OR2T35Q8NGX2 323 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 MYOZ3Q8TDC0 251 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 OR4F4Q96R69 305 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 PSENENQ9NZ42 101 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.22
DDX39A-220ENST00000593008 TSSC4Q9Y5U2 329 aaPredicted RBP7.46□□□□□ -1.22
DDX39A-220ENST00000593008 TRBV9A0A0B4J1U6 114 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 PMS2P5A8MQ11 134 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 PPP5D1E7EU14 171 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 F8W735 103 aaPredicted RBP7.45□□□□□ -1.22
DDX39A-220ENST00000593008 INS-IGF2F8WCM5 200 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 I3L2K1 104 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 DEDDO75618 318 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 CST7O76096 145 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 MT-CO2P00403 227 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 CAV2P51636 162 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 ERHP84090 104 aaKnown RBP7.45□□□□□ -1.22
DDX39A-220ENST00000593008 EXOSC2Q13868 293 aaKnown RBP7.45□□□□□ -1.22
DDX39A-220ENST00000593008 C15orf32Q32M92 178 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 PVRIGQ6DKI7 326 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 OR8G2PQ6IF36 304 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 TMEM14EPQ6UXP3 125 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 C8orf86Q6ZUL3 223 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 OR11H4Q8NGC9 324 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 OR1P1Q8NH06 330 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 ZNF414Q96IQ9 312 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 SRSF8Q9BRL6 282 aaKnown RBP7.45□□□□□ -1.22
DDX39A-220ENST00000593008 ZFP57Q9NU63 452 aa7.45□□□□□ -1.22
DDX39A-220ENST00000593008 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 ANKRD34BA5PLL1 514 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 L7N2F9 121 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 MED6O75586 246 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 ELANEP08246 267 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 OR8U8P0C7N1 319 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 SNCAP37840 140 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 HTR2BP41595 481 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 RPL23AP62750 156 aaKnown RBP7.44□□□□□ -1.22
DDX39A-220ENST00000593008 VAMP2P63027 116 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 C2orf83Q53S99 150 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 PRSS54Q6PEW0 395 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 ETV3LQ6ZN32 361 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 ACOT7LQ6ZUV0 252 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 TMEM217Q8N7C4 229 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 ZNF491Q8N8L2 437 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 UBAC2Q8NBM4 344 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 KLHL30-AS1Q8NEE0 82 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 OR1L6Q8NGR2 347 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 SCARB1Q8WTV0 552 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 DCUN1D4Q92564 292 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 SMIM8Q96KF7 97 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 HIPK2Q9H2X6 1198 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 THYN1Q9P016 225 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 NOTCH3Q9UM47 2321 aa7.44□□□□□ -1.22
DDX39A-220ENST00000593008 IGHV4OR15-8A0A075B7B6 117 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 A0A087WW49 117 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 IGHV3-35A0A0C4DH35 117 aa7.43□□□□□ -1.22
DDX39A-220ENST00000593008 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms