RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ZNF785A8K8V0 405 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 MED6O75586 246 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 KBTBD11O94819 623 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 IFNA17P01571 189 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 IGLV2-14P01704 120 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 RLN2P04090 185 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 IGKV1-16P04430 117 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 CSN3P07498 182 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 FGF2P09038 288 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 HOXB5P09067 269 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 SAA1P0DJI8 122 aaPredicted RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 PVALBP20472 110 aaPredicted RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 G6PCP35575 357 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 NDPQ00604 133 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 TMEM187Q14656 261 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 TNXAQ16473 311 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 C5orf64Q2M2E5 130 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 HSD17B13Q7Z5P4 300 aaPredicted RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 PPP1R27Q86WC6 154 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 SLC35G3Q8N808 338 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 LRTM2Q8N967 370 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 OR9G4Q8NGQ1 327 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 OR5B3Q8NH48 314 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 ASB13Q8WXK3 278 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 LSM10Q969L4 123 aaKnown RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 TMEM230Q96A57 120 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 TMEM56Q96MV1 263 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 GPHA2Q96T91 129 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 HINT2Q9BX68 163 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.54□□□□□ -1.68
VPS25-204ENST00000589577 BET1LQ9NYM9 111 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 APLNQ9ULZ1 77 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 TMEM56-RWDD3S4R434 201 aa4.54□□□□□ -1.68
VPS25-204ENST00000589577 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 A0A1W2PN81 502 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 C7orf66A4D0T2 115 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 CEBPZOSA8MTT3 80 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 OR11H12B2RN74 326 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 L7N2F9 121 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 GOSR2O14653 212 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 PROP1O75360 226 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 NDUFA3O95167 84 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 NDUFB8O95169 186 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 SLC25A6P12236 298 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 CHRNA7P36544 502 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 RPL27AP46776 148 aaKnown RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 HOXA1P49639 335 aaPredicted RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 VAMP2P63027 116 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 SUPT4H1P63272 117 aaKnown RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 RPP30P78346 268 aaKnown RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 EIF4EBP1Q13541 118 aaPredicted RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 PSG5Q15238 335 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 POU2AF1Q16633 256 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 IAH1Q2TAA2 248 aaPredicted RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 GGNBP1Q5YKI7 109 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 OR4A47Q6IF82 309 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 NOXA1Q86UR1 476 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 SELENOHQ8IZQ5 122 aaKnown RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 CADM3Q8N126 398 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 NPBQ8NG41 125 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 OR52B4Q8NGK2 314 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 OR1L8Q8NGR8 309 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 C5orf30Q96GV9 206 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 SEC22AQ96IW7 307 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 TMEM68Q96MH6 324 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 CIB3Q96Q77 187 aaPredicted RBP4.53□□□□□ -1.68
VPS25-204ENST00000589577 FBXL15Q9H469 300 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 PARP11Q9NR21 331 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 COA4Q9NYJ1 87 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 GSKIPQ9P0R6 139 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 MGAT4CQ9UBM8 478 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 ALG5Q9Y673 324 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 FAT1Q14517 4588 aa4.53□□□□□ -1.68
VPS25-204ENST00000589577 C15orf61A6NNL5 157 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 FAM90A26D6RGX4 464 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 UPK2O00526 184 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 SCGB2A1O75556 95 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 SCAF4O95104 1147 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 CA2P00918 260 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 HLA-DRB1P01911 266 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 DEFA4P12838 97 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 HLA-GP17693 338 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 NUP62P37198 522 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 SNCAP37840 140 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 BCAP31P51572 246 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 CRIP2P52943 208 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 SUB1P53999 127 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS25-204ENST00000589577 LINC00205P59089 165 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 OR2B8PP59922 312 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 NANOS2P60321 138 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 S100A10P60903 97 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 SPCS3P61009 180 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 RRAS2P62070 204 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 ERHP84090 104 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms