RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
TMED1-203ENST00000588259 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
TMED1-203ENST00000588259 MPTX1A8MV57 137 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 AKR1C2P52895 323 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
TMED1-203ENST00000588259 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 TCF24Q7RTU0 167 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 NXF2Q9GZY0 626 aaKnown RBP12.5□□□□□ -0.41
TMED1-203ENST00000588259 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
TMED1-203ENST00000588259 IGHV3-66A0A0C4DH42 116 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 ST8SIA3O43173 380 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 HPGDSO60760 199 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 TNFAIP8O95379 198 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 PI3P19957 117 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 SNCAP37840 140 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
TMED1-203ENST00000588259 HSPE1P61604 102 aaKnown RBP12.49□□□□□ -0.41
TMED1-203ENST00000588259 VBP1P61758 197 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
TMED1-203ENST00000588259 PLECQ15149 4684 aaKnown RBP12.49□□□□□ -0.41
TMED1-203ENST00000588259 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
TMED1-203ENST00000588259 IFNA17P01571 189 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 ELK1P19419 428 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 NPBWR1P48145 328 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 UCP3P55916 312 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
TMED1-203ENST00000588259 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
TMED1-203ENST00000588259 PHLDA1Q8WV24 401 aaPredicted RBP12.48□□□□□ -0.41
TMED1-203ENST00000588259 RARRES2Q99969 163 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 PDCD10Q9BUL8 212 aa12.48□□□□□ -0.41
TMED1-203ENST00000588259 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
TMED1-203ENST00000588259 HOXA1P49639 335 aaPredicted RBP12.47□□□□□ -0.41
TMED1-203ENST00000588259 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
TMED1-203ENST00000588259 ST8SIA2Q92186 375 aa12.47□□□□□ -0.41
TMED1-203ENST00000588259 ZNF414Q96IQ9 312 aa12.47□□□□□ -0.41
TMED1-203ENST00000588259 FUNDC2Q9BWH2 189 aa12.47□□□□□ -0.41
TMED1-203ENST00000588259 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
TMED1-203ENST00000588259 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
TMED1-203ENST00000588259 PPP5CP53041 499 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 PIGPP57054 158 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 TRIM16LQ309B1 348 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 LEMD1Q68G75 181 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 OR11H2Q8NH07 326 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
TMED1-203ENST00000588259 PUS1Q9Y606 427 aaKnown RBP eCLIP12.46□□□□□ -0.41
TMED1-203ENST00000588259 ATG12O94817 140 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 CD5P06127 495 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 RORCP51449 518 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 FAM90A2PQ658T7 463 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 TP53RKQ96S44 253 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
TMED1-203ENST00000588259 DFFBO76075 338 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 APOHP02749 345 aaPredicted RBP12.44□□□□□ -0.42
TMED1-203ENST00000588259 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.42
TMED1-203ENST00000588259 DEFB131AP59861 70 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
TMED1-203ENST00000588259 RND3P61587 244 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 ZNF486Q96H40 463 aaPredicted RBP12.44□□□□□ -0.42
TMED1-203ENST00000588259 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 COPZ2Q9P299 210 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 KLK11Q9UBX7 282 aa12.44□□□□□ -0.42
TMED1-203ENST00000588259 C3orf85A0A1B0GTC6 90 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 CORTO00230 105 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 DEFB4AO15263 64 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 CD3DP04234 171 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 IFNA4P05014 189 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 OPRK1P41145 380 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 ETV6P41212 452 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 RBMS2Q15434 407 aaKnown RBP12.43□□□□□ -0.42
TMED1-203ENST00000588259 SP6Q3SY56 376 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 SCGB2B2Q4G0G5 96 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
TMED1-203ENST00000588259 CCDC71LQ8N9Z2 235 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 OR52I2Q8NH67 350 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 AP3S1Q92572 193 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 RRNAD1Q96FB5 475 aaKnown RBP12.43□□□□□ -0.42
TMED1-203ENST00000588259 EXTL2Q9UBQ6 330 aa12.43□□□□□ -0.42
TMED1-203ENST00000588259 A0A0B4J293 547 aa12.42□□□□□ -0.42
TMED1-203ENST00000588259 A0A1B0GU03 582 aa12.42□□□□□ -0.42
TMED1-203ENST00000588259 DEDDO75618 318 aa12.42□□□□□ -0.42
TMED1-203ENST00000588259 NPPCP23582 126 aa12.42□□□□□ -0.42
TMED1-203ENST00000588259 TMEM187Q14656 261 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms