RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	LEMD1	Q68G75	181 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	LYSMD2	Q8IV50	215 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	CADM3	Q8N126	398 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	C11orf45	Q8TAV5	145 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	GATAD1	Q8WUU5	269 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	ST8SIA2	Q92186	375 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	SEC22A	Q96IW7	307 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	OR10C1	Q96KK4	312 aa		11.11	□□□□□ -0.63
SREBF1-222	ENST00000583732	ST8SIA3	O43173	380 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	APOH	P02749	345 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	CMC4	P56277	68 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	PAFAH1B2	P68402	229 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	RBMS2	Q15434	407 aa	Known RBP	11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	IZUMO4	Q1ZYL8	232 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	FAM90A2P	Q658T7	463 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	LGALS9C	Q6DKI2	356 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	TOMM20L	Q6UXN7	152 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	SNX29P2	Q8IUI4	249 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	TXN2	Q99757	166 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	GINS3	Q9BRX5	216 aa		11.1	□□□□□ -0.63
SREBF1-222	ENST00000583732	VPS13D	Q5THJ4	4388 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	DNASE2	O00115	360 aa	Predicted RBP	11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	DEFB131A	P59861	70 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	RPL11	P62913	178 aa	Known RBP	11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	ERH	P84090	104 aa	Known RBP	11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	KCTD21	Q4G0X4	260 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	RNASE12	Q5GAN4	147 aa	Known RBP	11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	LPCAT3	Q6P1A2	487 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	LILRB2	Q8N423	598 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	FAM24B	Q8N5W8	94 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	ZNF114	Q8NC26	417 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	GPX8	Q8TED1	209 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	KRTAP17-1	Q9BYP8	105 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	MS4A6A	Q9H2W1	248 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	COMMD3	Q9UBI1	195 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732	DNAH6	Q9C0G6	4158 aa		11.09	□□□□□ -0.63
SREBF1-222	ENST00000583732		M0QYG6	137 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	DFFB	O76075	338 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	IFNA4	P05014	189 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	HSPE1	P61604	102 aa	Known RBP	11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	YIPF6	Q96EC8	236 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	MFF	Q9GZY8	342 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	C11orf68	Q9H3H3	251 aa	Known RBP	11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	ZFAND3	Q9H8U3	227 aa		11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
SREBF1-222	ENST00000583732	RCVRN	P35243	200 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	NPBWR1	P48145	328 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	TMEM187	Q14656	261 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	ZNF600	Q6ZNG1	722 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	SLC35G3	Q8N808	338 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	DUSP18	Q8NEJ0	188 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732	RABAC1	Q9UI14	185 aa		11.07	□□□□□ -0.64
SREBF1-222	ENST00000583732		A0A1B0GU03	582 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PGAM2	P15259	253 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PI3	P19957	117 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	AKR1C2	P52895	323 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PRR20E	P86478	221 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PRR20C	P86479	221 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PRR20D	P86480	221 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PRR20B	P86481	221 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	PRR20A	P86496	221 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	C2CD4C	Q8TF44	421 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	VSIR	Q9H7M9	311 aa		11.06	□□□□□ -0.64
SREBF1-222	ENST00000583732	SMIM31	A0A1B0GVY4	71 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	IFNA17	P01571	189 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	IGKV1-5	P01602	117 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	SNCA	P37840	140 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	HOXA1	P49639	335 aa	Predicted RBP	11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	UCP3	P55916	312 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	NCS1	P62166	190 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	STH	Q8IWL8	128 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	STXBP6	Q8NFX7	210 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	SCPEP1	Q9HB40	452 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	HECTD4	Q9Y4D8	3996 aa		11.05	□□□□□ -0.64
SREBF1-222	ENST00000583732	IGLL5	B9A064	214 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	HPGDS	O60760	199 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	TMEM50A	O95807	157 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	CD5	P06127	495 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	PPP5C	P53041	499 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	TP53RK	Q96S44	253 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	PDCD10	Q9BUL8	212 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	TMEM231	Q9H6L2	316 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	VCX3A	Q9NNX9	186 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	MRPL36	Q9P0J6	103 aa	Known RBP	11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	HERC2	O95714	4834 aa		11.04	□□□□□ -0.64
SREBF1-222	ENST00000583732	APOA1	P02647	267 aa		11.03	□□□□□ -0.64
SREBF1-222	ENST00000583732	RNASE2	P10153	161 aa	Known RBP	11.03	□□□□□ -0.64
SREBF1-222	ENST00000583732	ELK1	P19419	428 aa		11.03	□□□□□ -0.64
SREBF1-222	ENST00000583732	ETV6	P41212	452 aa		11.03	□□□□□ -0.64
SREBF1-222	ENST00000583732	PIGP	P57054	158 aa		11.03	□□□□□ -0.64
SREBF1-222	ENST00000583732	AGRN	O00468	2067 aa		11.02	□□□□□ -0.64
SREBF1-222	ENST00000583732		A0A0B4J293	547 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	IGHV4-28	A0A0C4DH34	117 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	KNCN	A6PVL3	124 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	FAM25A	B3EWG3	89 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	FAM25C	B3EWG5	89 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	FAM25G	B3EWG6	89 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	ZNF688	P0C7X2	276 aa		11.02	□□□□□ -0.65
SREBF1-222	ENST00000583732	C4BPB	P20851	252 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms