RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, human

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT20-210	ENST00000580357	CSN3	P07498	182 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	HOXA1	P49639	335 aa	Predicted RBP	12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	MFAP2	P55001	183 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	NOXA1	Q86UR1	476 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	LRTM2	Q8N967	370 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	MISP3	Q96FF7	219 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	CCDC32	Q9BV29	185 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	CACNG5	Q9UF02	275 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357		S4R3C0	116 aa		12.52	□□□□□ -0.41
IFT20-210	ENST00000580357	ZNF320	A2RRD8	509 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357		K7EIM0	57 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	TGOLN2	O43493	480 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	SFT2D2	O95562	160 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	HLA-A	P01891	365 aa	Known RBP	12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	VAMP1	P23763	118 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	FCGR2B	P31994	310 aa	Predicted RBP	12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	GPR183	P32249	361 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	HTR2B	P41595	481 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	SMCO1	Q147U7	214 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	LYZL2	Q7Z4W2	148 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	HIPK2	Q9H2X6	1198 aa		12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	TECR	Q9NZ01	308 aa	Known RBP	12.51	□□□□□ -0.41
IFT20-210	ENST00000580357	LINC00854	A0A1B0GVQ3	168 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357		I3L2K1	104 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	SLC25A6	P12236	298 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	SPN	P16150	400 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	ELL	P55199	621 aa	Predicted RBP	12.5	□□□□□ -0.41
IFT20-210	ENST00000580357		Q56UQ5	140 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	SPINK9	Q5DT21	86 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	NMS	Q5H8A3	153 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	PVRIG	Q6DKI7	326 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	LCN12	Q6JVE5	192 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	MARC2	Q969Z3	335 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	HEYL	Q9NQ87	328 aa	Predicted RBP	12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	UFC1	Q9Y3C8	167 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	TMED3	Q9Y3Q3	217 aa		12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	PRKDC	P78527	4128 aa	Known RBP	12.5	□□□□□ -0.41
IFT20-210	ENST00000580357	OR2T8	A6NH00	312 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	CEBPZOS	A8MTT3	80 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	NUPL2	O15504	423 aa	Known RBP	12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	MT-CO2	P00403	227 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	GP9	P14770	177 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	NPBWR1	P48145	328 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	ATP5I	P56385	69 aa	Predicted RBP	12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	REL	Q04864	619 aa	Predicted RBP	12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	DUSP18	Q8NEJ0	188 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	PRR25	Q96S07	402 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	PTTG2	Q9NZH5	202 aa		12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	LSM4	Q9Y4Z0	139 aa	Known RBP	12.49	□□□□□ -0.41
IFT20-210	ENST00000580357	C2orf70	A6NJV1	201 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357		A8MWP6	167 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	NDUFA4	O00483	81 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	LYRM1	O43325	122 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	SCGB2A1	O75556	95 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	RNASE2	P10153	161 aa	Known RBP	12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	FOLR2	P14207	255 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	CBLN1	P23435	193 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	PPP1R1A	Q13522	171 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	BSX	Q3C1V8	233 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	UBAC2	Q8NBM4	344 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	DYNLRB2	Q8TF09	96 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	PINX1	Q96BK5	328 aa	Known RBP	12.48	□□□□□ -0.41
IFT20-210	ENST00000580357		U3KQ87	197 aa		12.48	□□□□□ -0.41
IFT20-210	ENST00000580357	IGHV3-21	A0A0B4J1V1	117 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	C9orf170	A2RU37	121 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	PLA2G10	O15496	165 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	GNG7	O60262	68 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	CTSG	P08311	255 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	TNFRSF9	Q07011	255 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	C2orf83	Q53S99	150 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	OR1S1	Q8NH92	325 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	COQ8A	Q8NI60	647 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	WDR12	Q9GZL7	423 aa	Known RBP	12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	PRR13	Q9NZ81	148 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	MRPL27	Q9P0M9	148 aa	Known RBP	12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	HSPB7	Q9UBY9	170 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	SMAD5-AS1	Q9Y6J3	95 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	SORL1	Q92673	2214 aa		12.47	□□□□□ -0.41
IFT20-210	ENST00000580357	FAM90A26	D6RGX4	464 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357		K7EMT4	169 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	MED6	O75586	246 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	OR4E1	P0C645	316 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	ZNF846	Q147U1	533 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	DEFB114	Q30KQ6	69 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	ANKRD55	Q3KP44	614 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	ETFRF1	Q6IPR1	90 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	ZC4H2	Q9NQZ6	224 aa		12.46	□□□□□ -0.41
IFT20-210	ENST00000580357	TRAV30	A0A087WSZ9	112 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357		F8W735	103 aa	Predicted RBP	12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	IFNA21	P01568	189 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	C8orf88	P0DMB2	117 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	BTC	P35070	178 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	MZT2B	Q6NZ67	158 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	LYG2	Q86SG7	212 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	UXS1	Q8NBZ7	420 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	B9D2	Q9BPU9	175 aa		12.45	□□□□□ -0.42
IFT20-210	ENST00000580357	CHRDL1	Q9BU40	450 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms