RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 PIGBOS1A0A0B4J2F0 54 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 I3L2K1 104 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 NDUFB6O95139 128 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 LY86O95711 162 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
MKS1-207ENST00000578789 BTCP35070 178 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 HOXA1P49639 335 aaPredicted RBP10.98□□□□□ -0.65
MKS1-207ENST00000578789 BSXQ3C1V8 233 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 SPSB3Q6PJ21 355 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
MKS1-207ENST00000578789 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
MKS1-207ENST00000578789 IGHV3-21A0A0B4J1V1 117 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 OR2T8A6NH00 312 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 C2orf70A6NJV1 201 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 SULT1A3P0DMM9 295 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 SULT1A4P0DMN0 295 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
MKS1-207ENST00000578789 CCR6P51684 374 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 UBE2MP61081 183 aaKnown RBP10.97□□□□□ -0.65
MKS1-207ENST00000578789 CNPY1Q3B7I2 92 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 FAM106AQ4KMX7 169 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 DEFB121Q5J5C9 76 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 CENPSQ8N2Z9 138 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 MISP3Q96FF7 219 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 ENY2Q9NPA8 101 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 GAR1Q9NY12 217 aaKnown RBP10.97□□□□□ -0.65
MKS1-207ENST00000578789 CACFD1Q9UGQ2 172 aa10.97□□□□□ -0.65
MKS1-207ENST00000578789 TMEM213A2RRL7 107 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 CORTO00230 105 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 SFT2D2O95562 160 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 MT-CO2P00403 227 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 SNCAP37840 140 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 SUB1P53999 127 aaKnown RBP eCLIP10.96□□□□□ -0.65
MKS1-207ENST00000578789 PPP1R1AQ13522 171 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 LCN12Q6JVE5 192 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 UNQ9165/PRO28630Q6UXU0 137 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 TXN2Q99757 166 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 B9D2Q9BPU9 175 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 ZC4H2Q9NQZ6 224 aa10.96□□□□□ -0.65
MKS1-207ENST00000578789 CENPXA8MT69 81 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 FOLR2P14207 255 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 EDN2P20800 178 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 VAMP1P23763 118 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 ADMP35318 185 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 MFAP4P55083 255 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 ELLP55199 621 aaPredicted RBP10.95□□□□□ -0.66
MKS1-207ENST00000578789 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 Q56UQ5 140 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 ZNF414Q96IQ9 312 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 CHRDL1Q9BU40 450 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 CCDC32Q9BV29 185 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
MKS1-207ENST00000578789 TECRQ9NZ01 308 aaKnown RBP10.95□□□□□ -0.66
MKS1-207ENST00000578789 A0A1B0GU03 582 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 LINC00854A0A1B0GVQ3 168 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 ZNF320A2RRD8 509 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 NDUFA4O00483 81 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 PLA2G10O15496 165 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 CTSGP08311 255 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 CBLN1P23435 193 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 HTR2BP41595 481 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 UBAC2Q8NBM4 344 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 DYNLRB2Q8TF09 96 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
MKS1-207ENST00000578789 PTTG2Q9NZH5 202 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 HSPB7Q9UBY9 170 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 UFC1Q9Y3C8 167 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
MKS1-207ENST00000578789 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 CEBPZOSA8MTT3 80 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 SLC25A6P12236 298 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 TNFRSF9Q07011 255 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
MKS1-207ENST00000578789 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 S100ZQ8WXG8 99 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 CACNG8Q8WXS5 425 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 FLVCR2Q9UPI3 526 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
MKS1-207ENST00000578789 IZUMO1RA6ND01 250 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
MKS1-207ENST00000578789 LYRM1O43325 122 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 PITX3O75364 302 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 NPBWR1P48145 328 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
MKS1-207ENST00000578789 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 Q8N1Y9 231 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 DUSP18Q8NEJ0 188 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 SLC24A4Q8NFF2 622 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
MKS1-207ENST00000578789 HEYLQ9NQ87 328 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms