RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	TMEM268	Q5VZI3	342 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	PVRIG	Q6DKI7	326 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501		Q8N1Y9	231 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SLC35G3	Q8N808	338 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TXN2	Q99757	166 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	PALMD	Q9NP74	551 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	DNAH9	Q9NYC9	4486 aa		10.33	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ZNF320	A2RRD8	509 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TMEM213	A2RRL7	107 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501		A8MZ25	164 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	C8orf88	P0DMB2	117 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ANXA3	P12429	323 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SNCA	P37840	140 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SUB1	P53999	127 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SUPT4H1	P63272	117 aa	Known RBP	10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SRPX	P78539	464 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CD300E	Q496F6	205 aa	Predicted RBP	10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	UNQ9165/PRO28630	Q6UXU0	137 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	DYNLRB2	Q8TF09	96 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MARC2	Q969Z3	335 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ZC4H2	Q9NQZ6	224 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	UFC1	Q9Y3C8	167 aa		10.32	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CORT	O00230	105 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	NDUFA4	O00483	81 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	AKR1C4	P17516	323 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MFAP4	P55083	255 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TMEM128	Q5BJH2	165 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TMEM190	Q8WZ59	177 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	GPR146	Q96CH1	333 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MISP3	Q96FF7	219 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ENY2	Q9NPA8	101 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MRPL27	Q9P0M9	148 aa	Known RBP	10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CACNG5	Q9UF02	275 aa		10.31	□□□□□ -0.76
CSNK1D-208	ENST00000578501	IGHV3-21	A0A0B4J1V1	117 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501		A0A0B4J2A0	478 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	IZUMO1R	A6ND01	250 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MT-CO2	P00403	227 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CTSG	P08311	255 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ADM	P35318	185 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	HOXA1	P49639	335 aa	Predicted RBP	10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	BAK1	Q16611	211 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	BSX	Q3C1V8	233 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TM4SF20	Q53R12	229 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501		Q56UQ5	140 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SPINK9	Q5DT21	86 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ZNF57	Q68EA5	555 aa	Predicted RBP	10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	GTSCR1	Q86UQ5	136 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	LGI3	Q8N145	548 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CHRDL1	Q9BU40	450 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SHPK	Q9UHJ6	478 aa		10.3	□□□□□ -0.76
CSNK1D-208	ENST00000578501	IGHV3-35	A0A0C4DH35	117 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	DUXB	A0A1W2PPF3	345 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	NAP1L6	A6NFF2	107 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	ZNF785	A8K8V0	405 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501		K7EMT4	169 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	NUPL2	O15504	423 aa	Known RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	FRMD6-AS1	P0C7T7	363 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SULT1A3	P0DMM9	295 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SULT1A4	P0DMN0	295 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	RNASE2	P10153	161 aa	Known RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	EDN2	P20800	178 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	HTR2B	P41595	481 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CCR6	P51684	374 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	REL	Q04864	619 aa	Predicted RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	RBMS2	Q15434	407 aa	Known RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	NMS	Q5H8A3	153 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CASC10	Q5T4H9	136 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TRIQK	Q629K1	86 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	UBAC2	Q8NBM4	344 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	UXS1	Q8NBZ7	420 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	CACNG8	Q8WXS5	425 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	SDHC	Q99643	169 aa	Predicted RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	DAZ1	Q9NQZ3	744 aa	Known RBP	10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	C19orf73	Q9NVV2	129 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	MLX	Q9UH92	298 aa		10.29	□□□□□ -0.76
CSNK1D-208	ENST00000578501	C15orf62	A8K5M9	175 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	IGHV4-30-4	P0DP06	118 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	NPBWR1	P48145	328 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	INPP1	P49441	399 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	LYZL2	Q7Z4W2	148 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TMED4	Q7Z7H5	227 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	LRTM2	Q8N967	370 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	DUSP18	Q8NEJ0	188 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	PINX1	Q96BK5	328 aa	Known RBP	10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	PRR13	Q9NZ81	148 aa		10.28	□□□□□ -0.76
CSNK1D-208	ENST00000578501	TRAV25	A0A0B4J276	109 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501		A0A1B0GU03	582 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	GNG7	O60262	68 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	UBE2M	P61081	183 aa	Known RBP	10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SMCO1	Q147U7	214 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	LINC00299	Q6ZSB3	139 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SBSPON	Q8IVN8	264 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	MUC7	Q8TAX7	377 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	ZNF414	Q96IQ9	312 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	OR10C1	Q96KK4	312 aa		10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	C7orf50	Q9BRJ6	194 aa	Known RBP	10.27	□□□□□ -0.77
CSNK1D-208	ENST00000578501	NDUFB6	O95139	128 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SFT2D2	O95562	160 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	SLC25A6	P12236	298 aa		10.26	□□□□□ -0.77
CSNK1D-208	ENST00000578501	TNFRSF9	Q07011	255 aa		10.26	□□□□□ -0.77

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