RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NABP2Q9BQ15 211 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 WDR83OSQ9Y284 106 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 WASHC3Q9Y3C0 194 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 CD24P25063 80 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 ZNF474Q6S9Z5 364 aaPredicted RBP11.25□□□□□ -0.61
NDEL1-204ENST00000578172 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
NDEL1-204ENST00000578172 DOPEY2Q9Y3R5 2298 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 TRAV1-1A0A0B4J248 108 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 SLC25A17O43808 307 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 CENPWQ5EE01 88 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
NDEL1-204ENST00000578172 GFRA3O60609 400 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 CXorf1O96002 111 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 LMO1P25800 156 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 EFNB3Q15768 340 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 TCTEX1D1Q8N7M0 179 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 TRBV24-1A0A075B6N3 115 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 ZNF137PP52743 207 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 OR1B1Q8NGR6 318 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 DAZAP1Q96EP5 407 aaKnown RBP11.24□□□□□ -0.61
NDEL1-204ENST00000578172 AGMATQ9BSE5 352 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 ZZEF1O43149 2961 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 COX7A2P2O60397 106 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
NDEL1-204ENST00000578172 C2orf88Q9BSF0 95 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 ZNF835Q9Y2P0 537 aa11.24□□□□□ -0.61
NDEL1-204ENST00000578172 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
NDEL1-204ENST00000578172 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 SLC35E1Q96K37 410 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
NDEL1-204ENST00000578172 IFI27L2Q9H2X8 130 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 SAP30LQ9HAJ7 183 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 GNG5P63218 68 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 MZT1Q08AG7 82 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
NDEL1-204ENST00000578172 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-204ENST00000578172 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 DLEU1O43261 78 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 SERF1AO75920 110 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 RELBQ01201 579 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 NEUROG1Q92886 237 aa11.23□□□□□ -0.61
NDEL1-204ENST00000578172 PARD6GQ9BYG4 376 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-204ENST00000578172 M0R2Z0 102 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 PDE6DO43924 150 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 LY6HO94772 140 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 LINC00869P0C866 280 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 CSPG4Q6UVK1 2322 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 IGHV3OR16-8A0A075B7F1 116 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 SSBP4Q9BWG4 385 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-204ENST00000578172 KMT2EQ8IZD2 1858 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 SRRM5B3KS81 715 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
NDEL1-204ENST00000578172 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
NDEL1-204ENST00000578172 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.61
NDEL1-204ENST00000578172 C15orf65H3BRN8 121 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 BMPR1BO00238 502 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 SAA1P0DJI8 122 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-204ENST00000578172 TMEM11P17152 192 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 TNXAQ16473 311 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 RPEL1Q2QD12 228 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 TNFSF13O75888 250 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 RND2P52198 227 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 ERHP84090 104 aaKnown RBP11.21□□□□□ -0.61
NDEL1-204ENST00000578172 JPT1Q9UK76 154 aa11.21□□□□□ -0.61
NDEL1-204ENST00000578172 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.62
NDEL1-204ENST00000578172 PMS2P5A8MQ11 134 aa11.21□□□□□ -0.62
NDEL1-204ENST00000578172 SNAI2O43623 268 aa11.21□□□□□ -0.62
NDEL1-204ENST00000578172 GFRALQ6UXV0 394 aa11.21□□□□□ -0.62
NDEL1-204ENST00000578172 TRGV8A0A0C4DH27 118 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 SRIP30626 198 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 HES1Q14469 280 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 ZNF738Q8NE65 137 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 NKX6-3A6NJ46 265 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 PRRG2O14669 202 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-204ENST00000578172 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-204ENST00000578172 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
NDEL1-204ENST00000578172 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 IGHV1-46P01743 117 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 BRS3P32247 399 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 MFAP2P55001 183 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
NDEL1-204ENST00000578172 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms