RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 NAP1L6A6NFF2 107 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 MFSD2BA6NFX1 497 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 CENPXA8MT69 81 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 A8MZ25 164 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 ST8SIA3O43173 380 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 OR2C1O95371 312 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 SRPXP78539 464 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 TMED4Q7Z7H5 227 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 GPHB5Q86YW7 130 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 LHFPL5Q8TAF8 219 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 ZNF502Q8TBZ5 544 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
VAPA-204ENST00000577901 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
VAPA-204ENST00000577901 SNCAP37840 140 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 MFAP2P55001 183 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 TMEM187Q14656 261 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
VAPA-204ENST00000577901 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 TMEM128Q5BJH2 165 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 PLET1Q6UQ28 207 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 ADAMTSL5Q6ZMM2 481 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 CACFD1Q9UGQ2 172 aa12.15□□□□□ -0.46
VAPA-204ENST00000577901 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 LGALS9O00182 355 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 CSN3P07498 182 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 GPR183P32249 361 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
VAPA-204ENST00000577901 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
VAPA-204ENST00000577901 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
VAPA-204ENST00000577901 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
VAPA-204ENST00000577901 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 IL34Q6ZMJ4 242 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 Q6ZRM9 215 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 LGI3Q8N145 548 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 SCARB1Q8WTV0 552 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 GPR146Q96CH1 333 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 MISP3Q96FF7 219 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 ATP6V0BQ99437 205 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
VAPA-204ENST00000577901 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 LINC00854A0A1B0GVQ3 168 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 SPCS3P61009 180 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 LINC00299Q6ZSB3 139 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 SDHCQ99643 169 aaPredicted RBP12.13□□□□□ -0.47
VAPA-204ENST00000577901 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
VAPA-204ENST00000577901 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
VAPA-204ENST00000577901 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 A6NHS1 94 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 K7EIM0 57 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 TGOLN2O43493 480 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 IL7P13232 177 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 VAMP1P23763 118 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 CCR6P51684 374 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 HAGHQ16775 308 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 AARDQ4LEZ3 155 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 Q56UQ5 140 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 SPSB3Q6PJ21 355 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 BSCL2Q96G97 398 aaPredicted RBP12.12□□□□□ -0.47
VAPA-204ENST00000577901 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
VAPA-204ENST00000577901 OR2T8A6NH00 312 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 CORTO00230 105 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 LCE2BO14633 110 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 SULT1A3P0DMM9 295 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 SULT1A4P0DMN0 295 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 MFAP4P55083 255 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 CNPY1Q3B7I2 92 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 LYZL2Q7Z4W2 148 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 UBAC2Q8NBM4 344 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
VAPA-204ENST00000577901 TXN2Q99757 166 aa12.11□□□□□ -0.47
VAPA-204ENST00000577901 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 I3L2K1 104 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 NDUFB6O95139 128 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 SFT2D2O95562 160 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 MT-CO2P00403 227 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
VAPA-204ENST00000577901 LCN12Q6JVE5 192 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 DYNLRB2Q8TF09 96 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 S100ZQ8WXG8 99 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
VAPA-204ENST00000577901 HEYLQ9NQ87 328 aaPredicted RBP12.1□□□□□ -0.47
VAPA-204ENST00000577901 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 NUPL2O15504 423 aaKnown RBP12.09□□□□□ -0.47
VAPA-204ENST00000577901 FOLR2P14207 255 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 CBLN1P23435 193 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 HTR2BP41595 481 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 NMSQ5H8A3 153 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 GTSCR1Q86UQ5 136 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms