RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 PGA3P0DJD8 388 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 GGT1P19440 569 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 IMPA1P29218 277 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 UBE2AP49459 152 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 LSM3P62310 102 aaKnown RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 EIF5AP63241 154 aaKnown RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 SLC35A1P78382 337 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 BTG2P78543 158 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 LOXL1Q08397 574 aaPredicted RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 ZNF266Q14584 549 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 PDGFRLQ15198 375 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 OR7A5Q15622 319 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 LGALSLQ3ZCW2 172 aaPredicted RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 C10orf91Q5T1B1 145 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 IBA57Q5T440 356 aaKnown RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 Q5XG85 94 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 LCN8Q6JVE9 175 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 CNIH2Q6PI25 160 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 EXOC3-AS1Q8N2X6 119 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 DEFB125Q8N687 156 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 CYB561D1Q8N8Q1 229 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 C5orf17Q8NAS9 161 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 NUP35Q8NFH5 326 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 OR2A1Q8NGT9 310 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 OR10G6Q8NH81 332 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 JOSD2Q8TAC2 188 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 BLNKQ8WV28 456 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 FAM19A4Q96LR4 140 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 PITX2Q99697 317 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 OR51E2Q9H255 320 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 DUSP21Q9H596 190 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 TUBA4BQ9H853 241 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 OR5AC2Q9NZP5 309 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 COMMD3Q9UBI1 195 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 MARCOQ9UEW3 520 aaPredicted RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 ZNF222Q9UK12 451 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 MRC1P22897 1456 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 CD163L1Q9NR16 1453 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 ZSWIM8A7E2V4 1837 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 ECM29Q5VYK3 1845 aa2.7□□□□□ -1.98
NUP88-208ENST00000574087 BAZ2AQ9UIF9 1905 aaKnown RBP2.7□□□□□ -1.98
NUP88-208ENST00000574087 FAM208AQ9UK61 1670 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 CCDC88AQ3V6T2 1871 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ALKQ9UM73 1620 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 FMN2Q9NZ56 1722 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 TMED7-TICAM2A0A0A6YYA0 188 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 TRAV26-2A0A0B4J265 109 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 TMEM212A6NML5 194 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 LINC01619G3V211 115 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 K7EQS6 105 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 CDC42EP2O14613 210 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 NDUFC2O95298 119 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 EPPINO95925 133 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 PMP2P02689 132 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 MT-ND4LP03901 98 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 CD2P06729 351 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 AKAIN1P0CW23 69 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 FGF6P10767 208 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ATF1P18846 271 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 H2BFSP57053 126 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 S100A10P60903 97 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 UBE2NP61088 152 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 PRDX1Q06830 199 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 PEA15Q15121 130 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 CCL15Q16663 113 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 PYDC2Q56P42 97 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 BCL2L15Q5TBC7 163 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 EIF5AL1Q6IS14 154 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 RASL11AQ6T310 242 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 LINC00173Q6ZV60 143 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ZNF720Q7Z2F6 126 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ZNF695Q8IW36 515 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 C20orf196Q8IYI0 205 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ZCCHC24Q8N2G6 241 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 OR10AD1Q8NGE0 317 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 OR52R1Q8NGF1 315 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 OR8B12Q8NGG6 310 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 OR51T1Q8NGJ9 327 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 SLAMF6Q96DU3 332 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 MRPS24Q96EL2 167 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 MIEN1Q9BRT3 115 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 GNB1LQ9BYB4 327 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 NOX3Q9HBY0 568 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 SMCO4Q9NRQ5 59 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 CBLN4Q9NTU7 201 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 DNAJC27Q9NZQ0 273 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 VAX2Q9UIW0 290 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 MED31Q9Y3C7 131 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 SIPA1L1O43166 1804 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 ATG2AQ2TAZ0 1938 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 TANC1Q9C0D5 1861 aa2.69□□□□□ -1.98
NUP88-208ENST00000574087 MYH9P35579 1960 aaKnown RBP2.69□□□□□ -1.98
NUP88-208ENST00000574087 NOTCH2Q04721 2471 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 TRAV5A0A0B4J249 113 aa2.68□□□□□ -1.98
NUP88-208ENST00000574087 A0A0G2JMM0 328 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms