RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 FAM106AQ4KMX7 169 aa20.99■□□□□ 0.95
SCARF1-207ENST00000573867 C11orf87Q6NUJ2 197 aa20.99■□□□□ 0.95
SCARF1-207ENST00000573867 BSCL2Q96G97 398 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-207ENST00000573867 ZNF436Q9C0F3 470 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-207ENST00000573867 SMAD5-AS1Q9Y6J3 95 aa20.99■□□□□ 0.95
SCARF1-207ENST00000573867 MT-CO2P00403 227 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 RNASE2P10153 161 aaKnown RBP20.98■□□□□ 0.95
SCARF1-207ENST00000573867 HOXA1P49639 335 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-207ENST00000573867 CCR6P51684 374 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 DEFB114Q30KQ6 69 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 TM4SF20Q53R12 229 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 PVRIGQ6DKI7 326 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 LYZL2Q7Z4W2 148 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 UBAC2Q8NBM4 344 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 ATP6V0BQ99437 205 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 PDCD10Q9BUL8 212 aa20.98■□□□□ 0.95
SCARF1-207ENST00000573867 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-207ENST00000573867 CBLN1P23435 193 aa20.97■□□□□ 0.95
SCARF1-207ENST00000573867 NMSQ5H8A3 153 aa20.97■□□□□ 0.95
SCARF1-207ENST00000573867 TRIQKQ629K1 86 aa20.97■□□□□ 0.95
SCARF1-207ENST00000573867 PINX1Q96BK5 328 aaKnown RBP20.97■□□□□ 0.95
SCARF1-207ENST00000573867 SLC25A21Q9BQT8 299 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-207ENST00000573867 HUWE1Q7Z6Z7 4374 aaKnown RBP20.97■□□□□ 0.95
SCARF1-207ENST00000573867 SPCS3P61009 180 aa20.96■□□□□ 0.95
SCARF1-207ENST00000573867 BSXQ3C1V8 233 aa20.96■□□□□ 0.95
SCARF1-207ENST00000573867 Q56UQ5 140 aa20.96■□□□□ 0.95
SCARF1-207ENST00000573867 LCN12Q6JVE5 192 aa20.96■□□□□ 0.95
SCARF1-207ENST00000573867 OR52E5Q8NH55 327 aa20.96■□□□□ 0.95
SCARF1-207ENST00000573867 LINC00854A0A1B0GVQ3 168 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 NXPH3O95157 252 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 CTSGP08311 255 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 TMEM128Q5BJH2 165 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 SPSB3Q6PJ21 355 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 OR2K2Q8NGT1 345 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 DYNLRB2Q8TF09 96 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 TMEM190Q8WZ59 177 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 MLXQ9UH92 298 aa20.95■□□□□ 0.94
SCARF1-207ENST00000573867 A0A0B4J2A0 478 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 ZNF785A8K8V0 405 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 IL7P13232 177 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 FCGR2BP31994 310 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-207ENST00000573867 SNCAP37840 140 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 ANKRD55Q3KP44 614 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 LGI3Q8N145 548 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 UXS1Q8NBZ7 420 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 ASCL2Q99929 193 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 SHPKQ9UHJ6 478 aa20.94■□□□□ 0.94
SCARF1-207ENST00000573867 SULT1A3P0DMM9 295 aa20.93■□□□□ 0.94
SCARF1-207ENST00000573867 SULT1A4P0DMN0 295 aa20.93■□□□□ 0.94
SCARF1-207ENST00000573867 BTCP35070 178 aa20.93■□□□□ 0.94
SCARF1-207ENST00000573867 MFAP4P55083 255 aa20.93■□□□□ 0.94
SCARF1-207ENST00000573867 PPP1R1AQ13522 171 aa20.93■□□□□ 0.94
SCARF1-207ENST00000573867 IGHV3OR16-8A0A075B7F1 116 aa20.92■□□□□ 0.94
SCARF1-207ENST00000573867 C8orf88P0DMB2 117 aa20.92■□□□□ 0.94
SCARF1-207ENST00000573867 ANXA3P12429 323 aa20.92■□□□□ 0.94
SCARF1-207ENST00000573867 INPP1P49441 399 aa20.92■□□□□ 0.94
SCARF1-207ENST00000573867 RBMS2Q15434 407 aaKnown RBP20.92■□□□□ 0.94
SCARF1-207ENST00000573867 FNDC4Q9H6D8 234 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-207ENST00000573867 ENY2Q9NPA8 101 aa20.92■□□□□ 0.94
SCARF1-207ENST00000573867 MRPL36Q9P0J6 103 aaKnown RBP20.92■□□□□ 0.94
SCARF1-207ENST00000573867 A6NHS1 94 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 FRMD6-AS1P0C7T7 363 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 VAMP1P23763 118 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 SRPXP78539 464 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 CENPSQ8N2Z9 138 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 WDR89Q96FK6 387 aaPredicted RBP20.91■□□□□ 0.94
SCARF1-207ENST00000573867 TXN2Q99757 166 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 TECRQ9NZ01 308 aaKnown RBP20.91■□□□□ 0.94
SCARF1-207ENST00000573867 FLVCR2Q9UPI3 526 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 UFC1Q9Y3C8 167 aa20.91■□□□□ 0.94
SCARF1-207ENST00000573867 NAP1L6A6NFF2 107 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 NDUFA4O00483 81 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 NDUFB6O95139 128 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 IGHV4-30-4P0DP06 118 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 ELLP55199 621 aaPredicted RBP20.9■□□□□ 0.94
SCARF1-207ENST00000573867 MLANAQ16655 118 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 BTNL8Q6UX41 500 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 TMEM61Q8N0U2 210 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 TMEM170AQ8WVE7 144 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 PALMDQ9NP74 551 aa20.9■□□□□ 0.94
SCARF1-207ENST00000573867 CEBPZOSA8MTT3 80 aa20.89■□□□□ 0.93
SCARF1-207ENST00000573867 SFT2D2O95562 160 aa20.89■□□□□ 0.93
SCARF1-207ENST00000573867 SMCO1Q147U7 214 aa20.89■□□□□ 0.93
SCARF1-207ENST00000573867 SBSPONQ8IVN8 264 aa20.89■□□□□ 0.93
SCARF1-207ENST00000573867 SUB1P53999 127 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARF1-207ENST00000573867 TNFRSF9Q07011 255 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 CNPY1Q3B7I2 92 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 LRTM2Q8N967 370 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 MARC2Q969Z3 335 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 HEYLQ9NQ87 328 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-207ENST00000573867 C19orf73Q9NVV2 129 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 MRPL27Q9P0M9 148 aaKnown RBP20.88■□□□□ 0.93
SCARF1-207ENST00000573867 HSPB7Q9UBY9 170 aa20.88■□□□□ 0.93
SCARF1-207ENST00000573867 PLA2G10O15496 165 aa20.87■□□□□ 0.93
SCARF1-207ENST00000573867 NUPL2O15504 423 aaKnown RBP20.87■□□□□ 0.93
SCARF1-207ENST00000573867 ZNF207O43670 478 aaKnown RBP20.87■□□□□ 0.93
SCARF1-207ENST00000573867 C20orf24Q9BUV8 137 aa20.87■□□□□ 0.93
SCARF1-207ENST00000573867 GAR1Q9NY12 217 aaKnown RBP20.87■□□□□ 0.93
SCARF1-207ENST00000573867 GNG7O60262 68 aa20.86■□□□□ 0.93
SCARF1-207ENST00000573867 CD7P09564 240 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms