RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 GNB1P62873 340 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRR20EP86478 221 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRR20CP86479 221 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRR20DP86480 221 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRR20BP86481 221 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRR20AP86496 221 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 GAMTQ14353 236 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 MMDQ15546 238 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 MLANAQ16655 118 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 C5orf64Q2M2E5 130 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 KHDC3LQ587J8 217 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 MIC13Q5XKP0 118 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 LCN15Q6UWW0 184 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC16A13Q7RTY0 426 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 LRRC75A-AS1Q8N1F1 130 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 THAP8Q8NA92 274 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 C17orf50Q8WW18 174 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 EIF5A2Q9GZV4 153 aaKnown RBP4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC45A2Q9UMX9 530 aa4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 F11RQ9Y624 299 aaKnown RBP4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 USP9YO00507 2555 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC1-204ENST00000571947 SMG1Q96Q15 3661 aaKnown RBP4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 A0A096LNT2 108 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 TRAV20A0A0B4J274 112 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 B4DSR2 109 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 NDUFS6O75380 124 aaKnown RBP4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 CNIH1O95406 144 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 IFNA1P01562 189 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 REG1AP05451 166 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM106CPP0CH98 169 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMEM11P17152 192 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 CD24P25063 80 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR10J1P30954 320 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 PPT1P50897 306 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 MFAP2P55001 183 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 FGF8P55075 233 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 B2MP61769 119 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 DEFA5Q01523 94 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 ICAM4Q14773 271 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 FXYD3Q14802 87 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 GUCA2BQ16661 112 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 HAGHQ16775 308 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 STPG3Q8N7X2 389 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR1P1Q8NH06 330 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 ABHD5Q8WTS1 349 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 SSMEM1Q8WWF3 244 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 RARRES2Q99969 163 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC35B3Q9H1N7 401 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 FNDC4Q9H6D8 234 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC25A22Q9H936 323 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 GNG13Q9P2W3 67 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 CHD6Q8TD26 2715 aa4.88□□□□□ -1.63
TRAPPC1-204ENST00000571947 TACC2O95359 2948 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGKV1OR2-108A0A075B7D4 117 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 TRAV40A0A0B4J280 105 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 TCRBV4S1A1TA0A5B7 111 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 HMGB3O15347 200 aaKnown RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 SCO1O75880 301 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 HSPB1P04792 205 aaKnown RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 STAG3L2P0CL84 134 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 STAG3L3P0CL85 134 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 BCL2P10415 239 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 CTRB1P17538 263 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 GATA3P23771 443 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 TAGLN2P37802 199 aaKnown RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 PSMB3P49720 205 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 RHOBP62745 196 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 LOXL1Q08397 574 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 DEFB113Q30KQ7 82 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 GCSAMLQ5JQS6 135 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM120AOSQ5T036 256 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 CTRB2Q6GPI1 263 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 ATRAIDQ6UW56 229 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 ZNF562Q6V9R5 426 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 RBMS3Q6XE24 437 aaKnown RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 CYP2G1PQ6ZSU1 146 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 SVBPQ8N300 66 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 Q8N9W7 124 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 LINC01356Q8N9X3 169 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR1L6Q8NGR2 347 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR2T6Q8NHC8 308 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 RXFP4Q8TDU9 374 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 MBD6Q96DN6 1003 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 C19orf24Q9BVV8 132 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 MEGF9Q9H1U4 602 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 C7orf69Q9H7B7 122 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms