RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 SCGB3A2Q96PL1 93 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 PRR25Q96S07 402 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 PRRT1Q99946 306 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 QTRT1Q9BXR0 403 aaKnown RBP3.73□□□□□ -1.81
CNOT1-219ENST00000569882 FXYD6Q9H0Q3 95 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 PALMDQ9NP74 551 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 SLC2A9Q9NRM0 540 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 BET1LQ9NYM9 111 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 KLK11Q9UBX7 282 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 MTFP1Q9UDX5 166 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 SCP2D1Q9UJQ7 156 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 PRNDQ9UKY0 176 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-219ENST00000569882 OR51B2Q9Y5P1 312 aa3.73□□□□□ -1.81
CNOT1-219ENST00000569882 PUS1Q9Y606 427 aaKnown RBP eCLIP3.73□□□□□ -1.81
CNOT1-219ENST00000569882 NOTCH1P46531 2555 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 C3orf85A0A1B0GTC6 90 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 H0Y980 276 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 H3BMQ9 156 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 CTDSP2O14595 271 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 IGHV3-23P01764 117 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 CRYGBP07316 175 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 FGF2P09038 288 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 OR13C7P0DN81 318 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 EGR2P11161 476 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 PSMB6P28072 239 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 SNCAP37840 140 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 HOXA1P49639 335 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 SPCS3P61009 180 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ERHP84090 104 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 SSBP1Q04837 148 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 FHL3Q13643 280 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 FAM106AQ4KMX7 169 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 Q56UQ5 140 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 VAX1Q5SQQ9 334 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 KPRPQ5T749 579 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 TRIQKQ629K1 86 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF57Q68EA5 555 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 CLEC19AQ6UXS0 136 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 PUSL1Q8N0Z8 303 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 TTC9CQ8N5M4 171 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 TMEM229BQ8NBD8 167 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ADAD2Q8NCV1 583 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 OR9G4Q8NGQ1 327 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 OR1L6Q8NGR2 347 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 DLX4Q92988 240 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 LSM10Q969L4 123 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 MRGPRFQ96AM1 343 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 PINX1Q96BK5 328 aaKnown RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF479Q96JC4 524 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 ABHD1Q96SE0 405 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 TUBA4BQ9H853 241 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 AKIP1Q9NQ31 210 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 RNF24Q9Y225 148 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 KCNIP3Q9Y2W7 256 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 NSG2Q9Y328 171 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 S4R3C0 116 aa3.72□□□□□ -1.81
CNOT1-219ENST00000569882 TRBV7-1A0A0A6YYK4 115 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 A0A0B4J293 547 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 PIGBOS1A0A0B4J2F0 54 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 WI2-2373I1.2A0A1W2PRP0 233 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 NPIPB5A8MRT5 1133 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 PPP5D1E7EU14 171 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 UPK2O00526 184 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 GGCTO75223 188 aaKnown RBP3.71□□□□□ -1.82
CNOT1-219ENST00000569882 YIF1AO95070 293 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 IGLV2-14P01704 120 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 FABP1P07148 127 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 ANXA3P12429 323 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 GP9P14770 177 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 AREGP15514 252 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 AKR1C4P17516 323 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 GPR183P32249 361 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.82
CNOT1-219ENST00000569882 UCP3P55916 312 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 GAMTQ14353 236 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 BAK1Q16611 211 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 GUCA2BQ16661 112 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 C19orf54Q5BKX5 351 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 FAAP20Q6NZ36 180 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 ZNF343Q6P1L6 599 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 PLET1Q6UQ28 207 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 TMED4Q7Z7H5 227 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 LYSMD2Q8IV50 215 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 SGPP2Q8IWX5 399 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 Q8N402 240 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 TOMM5Q8N4H5 51 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 OR13C8Q8NGS7 320 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 OR5B3Q8NH48 314 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 TERB2Q8NHR7 220 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 MARCH1Q8TCQ1 289 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 DYNC2LI1Q8TCX1 351 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 MYOZ3Q8TDC0 251 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 MITD1Q8WV92 249 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 SMIM4Q8WVI0 70 aa3.71□□□□□ -1.82
CNOT1-219ENST00000569882 SRSF8Q9BRL6 282 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms