RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 TFPI2P48307 235 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 PAFAH1B2P68402 229 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 CEMP1Q6PRD7 247 aaPredicted RBP8.84□□□□□ -0.99
UBR1-206ENST00000566493 SNX29P2Q8IUI4 249 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 PINX1Q96BK5 328 aaKnown RBP8.84□□□□□ -0.99
UBR1-206ENST00000566493 RNF2Q99496 336 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 MAP6D1Q9H9H5 199 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 I3L2K1 104 aa8.83□□□□□ -1
UBR1-206ENST00000566493 CHEK1O14757 476 aa8.83□□□□□ -1
UBR1-206ENST00000566493 MT-CO2P00403 227 aa8.83□□□□□ -1
UBR1-206ENST00000566493 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
UBR1-206ENST00000566493 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
UBR1-206ENST00000566493 UCP3P55916 312 aa8.83□□□□□ -1
UBR1-206ENST00000566493 HSPE1P61604 102 aaKnown RBP8.83□□□□□ -1
UBR1-206ENST00000566493 PRCDQ00LT1 54 aa8.83□□□□□ -1
UBR1-206ENST00000566493 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
UBR1-206ENST00000566493 ZNF114Q8NC26 417 aa8.83□□□□□ -1
UBR1-206ENST00000566493 SEC22AQ96IW7 307 aa8.83□□□□□ -1
UBR1-206ENST00000566493 GINS3Q9BRX5 216 aa8.83□□□□□ -1
UBR1-206ENST00000566493 NXF2Q9GZY0 626 aaKnown RBP8.83□□□□□ -1
UBR1-206ENST00000566493 IGKV3-7A0A075B6H7 116 aa8.82□□□□□ -1
UBR1-206ENST00000566493 IGHV3-49A0A0A0MS15 119 aa8.82□□□□□ -1
UBR1-206ENST00000566493 MPTX1A8MV57 137 aa8.82□□□□□ -1
UBR1-206ENST00000566493 TNFAIP8O95379 198 aa8.82□□□□□ -1
UBR1-206ENST00000566493 IGHV3-48P01763 117 aa8.82□□□□□ -1
UBR1-206ENST00000566493 CD5P06127 495 aa8.82□□□□□ -1
UBR1-206ENST00000566493 PGAM2P15259 253 aa8.82□□□□□ -1
UBR1-206ENST00000566493 SNCAP37840 140 aa8.82□□□□□ -1
UBR1-206ENST00000566493 EWSR1Q01844 656 aaKnown RBP eCLIP8.82□□□□□ -1
UBR1-206ENST00000566493 DUSP18Q8NEJ0 188 aa8.82□□□□□ -1
UBR1-206ENST00000566493 MRGPRFQ96AM1 343 aa8.82□□□□□ -1
UBR1-206ENST00000566493 OR10C1Q96KK4 312 aa8.82□□□□□ -1
UBR1-206ENST00000566493 CSTL1Q9H114 145 aa8.82□□□□□ -1
UBR1-206ENST00000566493 IGHV3OR16-13A0A075B7E8 117 aa8.81□□□□□ -1
UBR1-206ENST00000566493 IGHV3-74A0A0B4J1X5 117 aa8.81□□□□□ -1
UBR1-206ENST00000566493 FAM25AB3EWG3 89 aa8.81□□□□□ -1
UBR1-206ENST00000566493 FAM25CB3EWG5 89 aa8.81□□□□□ -1
UBR1-206ENST00000566493 FAM25GB3EWG6 89 aa8.81□□□□□ -1
UBR1-206ENST00000566493 HPGDSO60760 199 aa8.81□□□□□ -1
UBR1-206ENST00000566493 ATG12O94817 140 aa8.81□□□□□ -1
UBR1-206ENST00000566493 IGKV1-39P01597 117 aa8.81□□□□□ -1
UBR1-206ENST00000566493 IGKV1D-39P04432 117 aa8.81□□□□□ -1
UBR1-206ENST00000566493 ELK1P19419 428 aa8.81□□□□□ -1
UBR1-206ENST00000566493 NPBWR1P48145 328 aa8.81□□□□□ -1
UBR1-206ENST00000566493 NCS1P62166 190 aa8.81□□□□□ -1
UBR1-206ENST00000566493 MZT2AQ6P582 158 aa8.81□□□□□ -1
UBR1-206ENST00000566493 GBGT1Q8N5D6 347 aa8.81□□□□□ -1
UBR1-206ENST00000566493 GATAD1Q8WUU5 269 aa8.81□□□□□ -1
UBR1-206ENST00000566493 PDCD10Q9BUL8 212 aa8.81□□□□□ -1
UBR1-206ENST00000566493 M0QYG6 137 aa8.8□□□□□ -1
UBR1-206ENST00000566493 DNASE2O00115 360 aaPredicted RBP8.8□□□□□ -1
UBR1-206ENST00000566493 IFNA17P01571 189 aa8.8□□□□□ -1
UBR1-206ENST00000566493 RORCP51449 518 aa8.8□□□□□ -1
UBR1-206ENST00000566493 AKR1C2P52895 323 aa8.8□□□□□ -1
UBR1-206ENST00000566493 SUB1P53999 127 aaKnown RBP eCLIP8.8□□□□□ -1
UBR1-206ENST00000566493 VBP1P61758 197 aa8.8□□□□□ -1
UBR1-206ENST00000566493 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
UBR1-206ENST00000566493 ZNF124Q15973 351 aa8.8□□□□□ -1
UBR1-206ENST00000566493 SPINK9Q5DT21 86 aa8.8□□□□□ -1
UBR1-206ENST00000566493 TOMM20LQ6UXN7 152 aa8.8□□□□□ -1
UBR1-206ENST00000566493 TCF24Q7RTU0 167 aa8.8□□□□□ -1
UBR1-206ENST00000566493 SLC35G3Q8N808 338 aa8.8□□□□□ -1
UBR1-206ENST00000566493 ZNF486Q96H40 463 aaPredicted RBP8.8□□□□□ -1
UBR1-206ENST00000566493 RARRES2Q99969 163 aa8.8□□□□□ -1
UBR1-206ENST00000566493 FUNDC2Q9BWH2 189 aa8.8□□□□□ -1
UBR1-206ENST00000566493 TMEM231Q9H6L2 316 aa8.8□□□□□ -1
UBR1-206ENST00000566493 CORTO00230 105 aa8.79□□□□□ -1
UBR1-206ENST00000566493 ST8SIA3O43173 380 aa8.79□□□□□ -1
UBR1-206ENST00000566493 PIGPP57054 158 aa8.79□□□□□ -1
UBR1-206ENST00000566493 RND3P61587 244 aa8.79□□□□□ -1
UBR1-206ENST00000566493 RNASE12Q5GAN4 147 aaKnown RBP8.79□□□□□ -1
UBR1-206ENST00000566493 RNASE10Q5GAN6 216 aaKnown RBP8.79□□□□□ -1
UBR1-206ENST00000566493 FAM90A2PQ658T7 463 aa8.79□□□□□ -1
UBR1-206ENST00000566493 ZNF600Q6ZNG1 722 aa8.79□□□□□ -1
UBR1-206ENST00000566493 RNASE11Q8TAA1 199 aaKnown RBP8.79□□□□□ -1
UBR1-206ENST00000566493 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
UBR1-206ENST00000566493 AP3S1Q92572 193 aa8.79□□□□□ -1
UBR1-206ENST00000566493 ENY2Q9NPA8 101 aa8.79□□□□□ -1
UBR1-206ENST00000566493 C3orf85A0A1B0GTC6 90 aa8.78□□□□□ -1
UBR1-206ENST00000566493 SCGB2A1O75556 95 aa8.78□□□□□ -1
UBR1-206ENST00000566493 DFFBO76075 338 aa8.78□□□□□ -1
UBR1-206ENST00000566493 PI3P19957 117 aa8.78□□□□□ -1
UBR1-206ENST00000566493 HOXA1P49639 335 aaPredicted RBP8.78□□□□□ -1
UBR1-206ENST00000566493 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
UBR1-206ENST00000566493 TRIM16LQ309B1 348 aa8.78□□□□□ -1
UBR1-206ENST00000566493 ARRDC1Q8N5I2 433 aa8.78□□□□□ -1
UBR1-206ENST00000566493 CCDC71LQ8N9Z2 235 aa8.78□□□□□ -1
UBR1-206ENST00000566493 OR11H2Q8NH07 326 aa8.78□□□□□ -1
UBR1-206ENST00000566493 ZFAND1Q8TCF1 268 aa8.78□□□□□ -1
UBR1-206ENST00000566493 ST8SIA2Q92186 375 aa8.78□□□□□ -1
UBR1-206ENST00000566493 RRNAD1Q96FB5 475 aaKnown RBP8.78□□□□□ -1
UBR1-206ENST00000566493 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
UBR1-206ENST00000566493 MFFQ9GZY8 342 aa8.78□□□□□ -1
UBR1-206ENST00000566493 MS4A6AQ9H2W1 248 aa8.78□□□□□ -1
UBR1-206ENST00000566493 VSIRQ9H7M9 311 aa8.78□□□□□ -1
UBR1-206ENST00000566493 COPZ2Q9P299 210 aa8.78□□□□□ -1
UBR1-206ENST00000566493 PUS1Q9Y606 427 aaKnown RBP eCLIP8.78□□□□□ -1
UBR1-206ENST00000566493 A0A0B4J293 547 aa8.77□□□□□ -1.01
UBR1-206ENST00000566493 IGHV3-66A0A0C4DH42 116 aa8.77□□□□□ -1.01
UBR1-206ENST00000566493 A0A1W2PS18 150 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms