RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 UQCC1Q9NVA1 299 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CEP295Q9C0D2 2601 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MED13Q9UHV7 2174 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 A0A087WUU8 490 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 KLLNB2CW77 178 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 UPK2O00526 184 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ORC5O43913 435 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TPST1O60507 370 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CTLA4P16410 223 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CCL1P22362 96 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TALDO1P37837 337 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 AKR1C3P42330 323 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 RPL23P62829 140 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 GNG5P63218 68 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CXCL6P80162 114 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MEF2CQ06413 473 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TBPL2Q6SJ96 375 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ATP5L2Q7Z4Y8 100 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DEFB125Q8N687 156 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZIC4Q8N9L1 334 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZNF439Q8NDP4 499 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SPTSSAQ969W0 71 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 KCNS1Q96KK3 526 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ERMAPQ96PL5 475 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 GPX7Q96SL4 187 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 OR51I2Q9H344 312 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZNF702PQ9H963 129 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SCN3BQ9NY72 215 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CACNG5Q9UF02 275 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 INSIG2Q9Y5U4 225 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 FLVCR1Q9Y5Y0 555 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 HSPE1-MOB4S4R3N1 261 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CHD6Q8TD26 2715 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DNAH14Q0VDD8 3507 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 DMDP11532 3685 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 CPAMD8Q8IZJ3 1885 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 BAHCC1Q9P281 2608 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A0G2JMM0 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A1W2PPB8 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A1W2PRS3 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 hADV38S2A0JD32 116 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 OR5H1A6NKK0 313 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 KIR3DP1A8MWS1 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 H3BSA7 217 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 M0R1X1 148 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 MMP23AO75900 390 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 IGHMP01871 453 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 C1QBP02746 253 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 SYNJ2BPP57105 145 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 DAD1P61803 113 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 CDK5Q00535 292 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 ZNF404Q494X3 552 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 KLHL12Q53G59 568 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 FAM27BQ5VT28 67 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 C20orf196Q8IYI0 205 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 TEX29Q8N6K0 151 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 STARD4Q96DR4 205 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 TSSK6Q9BXA6 273 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 OR52D1Q9H346 318 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 SLC25A22Q9H936 323 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 JPT1Q9UK76 154 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 PRNDQ9UKY0 176 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 ZNF432O94892 652 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 BGLAPP02818 100 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 PRB1P04280 392 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 KLK2P20151 261 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GADD45AP24522 165 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GRB2P62993 217 aaKnown RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 HOXC5Q00444 222 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IFITM3Q01628 133 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 TWIST1Q15672 202 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 Q6ZRU5 148 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GOLT1AQ6ZVE7 132 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 DRAM1Q8N682 238 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 C9orf106Q8NAJ2 232 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 ITLN2Q8WWU7 325 aaPredicted RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 RASL12Q9NYN1 266 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 FAM215AQ9Y5M1 114 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IER3IP1Q9Y5U9 82 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IGF2RP11717 2491 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 CHD8Q9HCK8 2581 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 CACNA1GO43497 2377 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 GTF3C1Q12789 2109 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms