RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 C11orf94C9JXX5 98 aa12.11□□□□□ -0.47
CMTM3-205ENST00000562707 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
CMTM3-205ENST00000562707 DEFB131AP59861 70 aa12.11□□□□□ -0.47
CMTM3-205ENST00000562707 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
CMTM3-205ENST00000562707 DUSP18Q8NEJ0 188 aa12.11□□□□□ -0.47
CMTM3-205ENST00000562707 NPBWR1P48145 328 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 ERHP84090 104 aaKnown RBP12.1□□□□□ -0.47
CMTM3-205ENST00000562707 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 LPCAT3Q6P1A2 487 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 STHQ8IWL8 128 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 CENPSQ8N2Z9 138 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 YTHDF1Q9BYJ9 559 aaKnown RBP12.1□□□□□ -0.47
CMTM3-205ENST00000562707 MS4A6AQ9H2W1 248 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 FAM212BQ9NTI7 297 aaPredicted RBP12.1□□□□□ -0.47
CMTM3-205ENST00000562707 APLNQ9ULZ1 77 aa12.1□□□□□ -0.47
CMTM3-205ENST00000562707 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 NAT1P18440 290 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
CMTM3-205ENST00000562707 PHLDA2Q53GA4 152 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 TMEM69Q5SWH9 247 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 CROCCP3Q8IVE0 287 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 FXYD6Q9H0Q3 95 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 HRH4Q9H3N8 390 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 ANAPC10Q9UM13 185 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
CMTM3-205ENST00000562707 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
CMTM3-205ENST00000562707 TSPAN5P62079 268 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 ZNF600Q6ZNG1 722 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 Q9H521 79 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
CMTM3-205ENST00000562707 PRSS3P35030 304 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 TAS2R20P59543 309 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 TMEM41BQ5BJD5 291 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 UBE2NLQ5JXB2 153 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 TBC1D26Q86UD7 250 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 Q8NAQ8 132 aa12.07□□□□□ -0.48
CMTM3-205ENST00000562707 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
CMTM3-205ENST00000562707 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 A0A1W2PS18 150 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 MIFP14174 115 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 NPPCP23582 126 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 HLA-DMAP28067 261 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 HLA-DMBP28068 263 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 HRH1P35367 487 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 SNCAP37840 140 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 MORN3Q6PF18 240 aaPredicted RBP12.06□□□□□ -0.48
CMTM3-205ENST00000562707 LINC00336Q6ZUF6 198 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 LYSMD2Q8IV50 215 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
CMTM3-205ENST00000562707 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 TMEM50AO95807 157 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
CMTM3-205ENST00000562707 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 SPP1P10451 314 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
CMTM3-205ENST00000562707 SAMD12Q8N8I0 201 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 MRGPRFQ96AM1 343 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 HECTD4Q9Y4D8 3996 aa12.05□□□□□ -0.48
CMTM3-205ENST00000562707 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
CMTM3-205ENST00000562707 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
CMTM3-205ENST00000562707 NEDD8Q15843 81 aa12.04□□□□□ -0.48
CMTM3-205ENST00000562707 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
CMTM3-205ENST00000562707 STXBP6Q8NFX7 210 aa12.04□□□□□ -0.48
CMTM3-205ENST00000562707 NARS2Q96I59 477 aaKnown RBP12.04□□□□□ -0.48
CMTM3-205ENST00000562707 ZFAND3Q9H8U3 227 aa12.04□□□□□ -0.48
CMTM3-205ENST00000562707 IGHV4-4A0A075B6R2 117 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 A0A1B0GU03 582 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 CORTO00230 105 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 SUB1P53999 127 aaKnown RBP eCLIP12.03□□□□□ -0.48
CMTM3-205ENST00000562707 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 Q6ZTC4 211 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 METTL26Q96S19 204 aa12.03□□□□□ -0.48
CMTM3-205ENST00000562707 K7EQG2 157 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 SCGB2A1O75556 95 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 IFNA17P01571 189 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-205ENST00000562707 UCP3P55916 312 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 TMEM230Q96A57 120 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 PDCD10Q9BUL8 212 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 RNF126Q9BV68 326 aa12.02□□□□□ -0.49
CMTM3-205ENST00000562707 SMIM31A0A1B0GVY4 71 aa12.01□□□□□ -0.49
CMTM3-205ENST00000562707 KNCNA6PVL3 124 aa12.01□□□□□ -0.49
CMTM3-205ENST00000562707 ZNF705EA8MWA4 302 aaPredicted RBP12.01□□□□□ -0.49
CMTM3-205ENST00000562707 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
CMTM3-205ENST00000562707 RPS19P39019 145 aaKnown RBP12.01□□□□□ -0.49
CMTM3-205ENST00000562707 EIF2B2P49770 351 aaKnown RBP12.01□□□□□ -0.49
CMTM3-205ENST00000562707 IZUMO4Q1ZYL8 232 aa12.01□□□□□ -0.49
CMTM3-205ENST00000562707 ACTL10Q5JWF8 245 aa12.01□□□□□ -0.49
CMTM3-205ENST00000562707 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms