RNA–Protein interactions for RNA: ENST00000561556.5

RHBDL1-204, Transcript of rhomboid like 1, humanhuman

TSL 3

Gene RHBDL1, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL1-204ENST00000561556 UCP3P55916 312 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 HSPE1P61604 102 aaKnown RBP16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 LSM3P62310 102 aaKnown RBP16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 TCF24Q7RTU0 167 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 MRGPRFQ96AM1 343 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 ZNF414Q96IQ9 312 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 C11orf68Q9H3H3 251 aaKnown RBP16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 FRAS1Q86XX4 4008 aa16.82■□□□□ 0.28
RHBDL1-204ENST00000561556 IGHV3OR16-13A0A075B7E8 117 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 IGHV3-74A0A0B4J1X5 117 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 IGHV3-48P01763 117 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 RCVRNP35243 200 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 NPBWR1P48145 328 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 LGALS9CQ6DKI2 356 aa16.81■□□□□ 0.28
RHBDL1-204ENST00000561556 DNASE2O00115 360 aaPredicted RBP16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 ST8SIA3O43173 380 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 IGKV1-39P01597 117 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 IGKV1D-39P04432 117 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 IFNA4P05014 189 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 RPP25LQ8N5L8 163 aaKnown RBP16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 DUSP18Q8NEJ0 188 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 OR11H2Q8NH07 326 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 C11orf45Q8TAV5 145 aa16.8■□□□□ 0.28
RHBDL1-204ENST00000561556 CA1P00915 261 aaPredicted RBP16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 APOA1P02647 267 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 SNCAP37840 140 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 RBMS2Q15434 407 aaKnown RBP16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 TOMM20LQ6UXN7 152 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 SNX29P2Q8IUI4 249 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 YIPF6Q96EC8 236 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 TMEM231Q9H6L2 316 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 COMMD3Q9UBI1 195 aa16.79■□□□□ 0.28
RHBDL1-204ENST00000561556 DFFBO76075 338 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 RPL11P62913 178 aaKnown RBP16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 ZNF600Q6ZNG1 722 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 SLC35G3Q8N808 338 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 ST8SIA2Q92186 375 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 VSIRQ9H7M9 311 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 FBXL17Q9UF56 701 aa16.78■□□□□ 0.28
RHBDL1-204ENST00000561556 NANOS2P60321 138 aaKnown RBP16.77■□□□□ 0.28
RHBDL1-204ENST00000561556 TMEM187Q14656 261 aa16.77■□□□□ 0.28
RHBDL1-204ENST00000561556 MS4A6AQ9H2W1 248 aa16.77■□□□□ 0.28
RHBDL1-204ENST00000561556 PUS1Q9Y606 427 aaKnown RBP eCLIP16.77■□□□□ 0.28
RHBDL1-204ENST00000561556 A0A087WXM4 84 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 TRAV2A0A0B4J234 112 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 CORTO00230 105 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 DEDDO75618 318 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 ATG12O94817 140 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 PGAM2P15259 253 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 AKR1C2P52895 323 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 SUB1P53999 127 aaKnown RBP eCLIP16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 SPINK9Q5DT21 86 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 ZNF486Q96H40 463 aaPredicted RBP16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 PDCD10Q9BUL8 212 aa16.76■□□□□ 0.27
RHBDL1-204ENST00000561556 SCGB2A1O75556 95 aa16.75■□□□□ 0.27
RHBDL1-204ENST00000561556 IFNA17P01571 189 aa16.75■□□□□ 0.27
RHBDL1-204ENST00000561556 DEFB131AP59861 70 aa16.75■□□□□ 0.27
RHBDL1-204ENST00000561556 RND3P61587 244 aa16.75■□□□□ 0.27
RHBDL1-204ENST00000561556 IGHV3-66A0A0C4DH42 116 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 A0A1W2PS18 150 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 INS-IGF2F8WCM5 200 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 M0QYG6 137 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 APOHP02749 345 aaPredicted RBP16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 IZUMO4Q1ZYL8 232 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 LEMD1Q68G75 181 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 STHQ8IWL8 128 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 C2CD4CQ8TF44 421 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 ZFAND3Q9H8U3 227 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 RABAC1Q9UI14 185 aa16.74■□□□□ 0.27
RHBDL1-204ENST00000561556 TMEM50AO95807 157 aa16.73■□□□□ 0.27
RHBDL1-204ENST00000561556 NPPCP23582 126 aa16.73■□□□□ 0.27
RHBDL1-204ENST00000561556 HOXA1P49639 335 aaPredicted RBP16.73■□□□□ 0.27
RHBDL1-204ENST00000561556 TCTAP57738 103 aa16.73■□□□□ 0.27
RHBDL1-204ENST00000561556 ENY2Q9NPA8 101 aa16.73■□□□□ 0.27
RHBDL1-204ENST00000561556 IGKV1-5P01602 117 aa16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 PIGPP57054 158 aa16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 RNASE10Q5GAN6 216 aaKnown RBP16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 LILRB2Q8N423 598 aa16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 NARS2Q96I59 477 aaKnown RBP16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 METTL26Q96S19 204 aa16.72■□□□□ 0.27
RHBDL1-204ENST00000561556 A0A0B4J293 547 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 DEFB4AO15263 64 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 HPGDSO60760 199 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 TNFAIP8O95379 198 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 ELK1P19419 428 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 PI3P19957 117 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 NCS1P62166 190 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 TMEM41BQ5BJD5 291 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 ARRDC1Q8N5I2 433 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 TP53RKQ96S44 253 aa16.71■□□□□ 0.27
RHBDL1-204ENST00000561556 C3orf85A0A1B0GTC6 90 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 A0A1B0GU03 582 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 FAM25AB3EWG3 89 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 FAM25CB3EWG5 89 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 FAM25GB3EWG6 89 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 OPRK1P41145 380 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 TRIM16LQ309B1 348 aa16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 RRNAD1Q96FB5 475 aaKnown RBP16.7■□□□□ 0.26
RHBDL1-204ENST00000561556 COPZ2Q9P299 210 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms