RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
AC087878.1-201ENST00000560709 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
AC087878.1-201ENST00000560709 MED13LQ71F56 2210 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 E7EUB6 86 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 FCN1O00602 326 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 CRYGCP07315 174 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 CTRB1P17538 263 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 TAGLN2P37802 199 aaKnown RBP9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 SSBP2P81877 361 aaPredicted RBP9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 AKR1C1Q04828 323 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 FAM120AOSQ5T036 256 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 CTRB2Q6GPI1 263 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 MAPK1IP1LQ8NDC0 245 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 RSG1Q9BU20 258 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 TREM1Q9NP99 234 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 THYN1Q9P016 225 aa9.4□□□□□ -0.9
AC087878.1-201ENST00000560709 FBN2P35556 2912 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 IGHV7-81A0A0B4J1V7 117 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 A6NDX4 124 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 CD5LO43866 347 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 IFNA1P01562 189 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 DEFA4P12838 97 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 M6PRP20645 277 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 PPT1P50897 306 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 RBMS3Q6XE24 437 aaKnown RBP9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 PIFOQ8TCI5 191 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 NARS2Q96I59 477 aaKnown RBP9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 C19orf24Q9BVV8 132 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 RPRMQ9NS64 109 aa9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
AC087878.1-201ENST00000560709 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 H3BUX3 64 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 MT-CO2P00403 227 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 AREGP15514 252 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 PAX6P26367 422 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 SELENOTP62341 195 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 GUK1Q16774 197 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 TOR2AQ5JU69 321 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 OR10G4Q8NGN3 311 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 OR10G9Q8NGN4 311 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 OR10G7Q8NGN6 311 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 PRDM13Q9H4Q3 707 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 ZNF580Q9UK33 172 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 CREBBPQ92793 2442 aa9.38□□□□□ -0.91
AC087878.1-201ENST00000560709 TNCP24821 2201 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 HNF1AP20823 631 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 FHITP49789 147 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 KLK9Q2XQG4 91 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 BPIFCQ8NFQ6 507 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 FAM110DQ8TAY7 271 aaPredicted RBP9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 GGTLC1Q9BX51 225 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 WNT10AQ9GZT5 417 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 TMEM160Q9NX00 188 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 KLK9Q9UKQ9 250 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 TET2Q6N021 2002 aaPredicted RBP9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 TENM4Q6N022 2769 aa9.37□□□□□ -0.91
AC087878.1-201ENST00000560709 AGPAT2O15120 278 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 REG1AP05451 166 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 CD5P06127 495 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 FABP1P07148 127 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 IER3P46695 156 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 GAMTQ14353 236 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 AKIRIN2Q53H80 203 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 FBLN7Q53RD9 439 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 Q6YL49 198 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 THAP8Q8NA92 274 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 RCC1LQ96I51 464 aaKnown RBP9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 RNF2Q99496 336 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 MGST2Q99735 147 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 CR1P17927 2039 aa9.36□□□□□ -0.91
AC087878.1-201ENST00000560709 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
AC087878.1-201ENST00000560709 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms