RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 THYN1Q9P016 225 aa5.1□□□□□ -1.59
SPG11-221ENST00000560299 SOX21Q9Y651 276 aaPredicted RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 FBN1P35555 2871 aaKnown RBP5.1□□□□□ -1.59
SPG11-221ENST00000560299 IGLC7A0M8Q6 106 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 NPIPB5A8MRT5 1133 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 E7EUB6 86 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 FNDC10F2Z333 226 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 TRIM77I1YAP6 450 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 AP4M1O00189 453 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 HOXA3O43365 443 aaPredicted RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 IFNA7P01567 189 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 CRYBA1P05813 215 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 RNASE2P10153 161 aaKnown RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 TPT1P13693 172 aaKnown RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 HIST1H1BP16401 226 aaKnown RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 GPX4P36969 197 aaPredicted RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 UBA52P62987 128 aaKnown RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 DLK1P80370 383 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 WT1-ASQ06250 92 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 RAB31Q13636 194 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 CLINT1Q14677 625 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 BSXQ3C1V8 233 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 AKIRIN2Q53H80 203 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 C10orf55Q5SWW7 151 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 UNQ5815/PRO19632Q6UWF5 114 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 SLC35E3Q7Z769 313 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 TTC9CQ8N5M4 171 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 SIGLECL1Q8N7X8 197 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 ZNF114Q8NC26 417 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 OR4C12Q96R67 309 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 P2RX4Q99571 388 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 ATP5SQ99766 215 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 TMEM147Q9BVK8 224 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 SMIM3Q9BZL3 60 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 SLA2Q9H6Q3 261 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 PARP11Q9NR21 331 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 TNFRSF19Q9NS68 423 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 UQCC1Q9NVA1 299 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 FBXL17Q9UF56 701 aa5.09□□□□□ -1.59
SPG11-221ENST00000560299 F11RQ9Y624 299 aaKnown RBP5.09□□□□□ -1.59
SPG11-221ENST00000560299 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 CGB1A6NKQ9 187 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 TEX22C9J3V5 150 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 ATP6V0E1O15342 81 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 TCF21O43680 179 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 SOX15O60248 233 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 MPDU1O75352 247 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 SCGB2A1O75556 95 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 IGHG2P01859 326 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 IGF1P05019 195 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 CRYGCP07315 174 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 AREGP15514 252 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 CTRB1P17538 263 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 OPRK1P41145 380 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 CRIP2P52943 208 aaPredicted RBP5.08□□□□□ -1.6
SPG11-221ENST00000560299 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 CTRB2Q6GPI1 263 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 BAP18Q8IXM2 172 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 ZNF709Q8N972 641 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 UBAC2Q8NBM4 344 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 LFNGQ8NES3 379 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 SPATA3Q8NHX4 192 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 STOML3Q8TAV4 291 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 GNPNAT1Q96EK6 184 aaPredicted RBP5.08□□□□□ -1.6
SPG11-221ENST00000560299 PHYHIPLQ96FC7 376 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 MISP3Q96FF7 219 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 SLC35E1Q96K37 410 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 ZNF48Q96MX3 618 aaPredicted RBP5.08□□□□□ -1.6
SPG11-221ENST00000560299 FAM103A1Q9BTL3 118 aaKnown RBP5.08□□□□□ -1.6
SPG11-221ENST00000560299 PARD6GQ9BYG4 376 aaPredicted RBP5.08□□□□□ -1.6
SPG11-221ENST00000560299 WNT10AQ9GZT5 417 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 NPVFQ9HCQ7 196 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 ZNF355PQ9NSJ1 428 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 ZNF580Q9UK33 172 aa5.08□□□□□ -1.6
SPG11-221ENST00000560299 TRAV41A0A0B4J266 112 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 A0A1B0GW64 132 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 PMS2P5A8MQ11 134 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 H3BUA1 57 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 FBXO24O75426 580 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 AMY1AP04745 511 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 REG1AP05451 166 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 APELAP0DMC3 54 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 EGR2P11161 476 aaPredicted RBP5.07□□□□□ -1.6
SPG11-221ENST00000560299 BLCAPP62952 87 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 SLC35B1P78383 322 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 SSBP2P81877 361 aaPredicted RBP5.07□□□□□ -1.6
SPG11-221ENST00000560299 AKR1C1Q04828 323 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 CD69Q07108 199 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 ECSCRQ19T08 205 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 FBLN7Q53RD9 439 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 RPL7L1Q6DKI1 246 aaKnown RBP5.07□□□□□ -1.6
SPG11-221ENST00000560299 TEPPQ6URK8 271 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 TEX261Q6UWH6 196 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 ZNF767PQ75MW2 155 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 PRIMA1Q86XR5 153 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 OR5T1Q8NG75 326 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 FAM110DQ8TAY7 271 aaPredicted RBP5.07□□□□□ -1.6
SPG11-221ENST00000560299 TMEM158Q8WZ71 300 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms