RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 C11orf40Q8WZ69 217 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 TM2D3Q9BRN9 247 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 MYH10P35580 1976 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 UNC79Q9P2D8 2635 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 ARAP1Q96P48 1450 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 SLX4Q8IY92 1834 aa2.01□□□□□ -2.09
SPG11-218ENST00000559754 SHANK3Q9BYB0 1731 aa2□□□□□ -2.09
SPG11-218ENST00000559754 IGKV1D-17A0A075B6S4 117 aa2□□□□□ -2.09
SPG11-218ENST00000559754 TRAV41A0A0B4J266 112 aa2□□□□□ -2.09
SPG11-218ENST00000559754 H3BPC8 53 aa2□□□□□ -2.09
SPG11-218ENST00000559754 C19orf84I3L1E1 186 aa2□□□□□ -2.09
SPG11-218ENST00000559754 TXNDC9O14530 226 aa2□□□□□ -2.09
SPG11-218ENST00000559754 TP53I11O14683 189 aa2□□□□□ -2.09
SPG11-218ENST00000559754 PSCAO43653 123 aa2□□□□□ -2.09
SPG11-218ENST00000559754 ZNF73O43830 326 aaPredicted RBP2□□□□□ -2.09
SPG11-218ENST00000559754 BANF1O75531 89 aa2□□□□□ -2.09
SPG11-218ENST00000559754 SOD1P00441 154 aa2□□□□□ -2.09
SPG11-218ENST00000559754 PPBPP02775 128 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CSN2P05814 226 aa2□□□□□ -2.09
SPG11-218ENST00000559754 GZMBP10144 247 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CCL5P13501 91 aa2□□□□□ -2.09
SPG11-218ENST00000559754 ALDH3A1P30838 453 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CA5AP35218 305 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CD200P41217 278 aa2□□□□□ -2.09
SPG11-218ENST00000559754 PSMD8P48556 350 aa2□□□□□ -2.09
SPG11-218ENST00000559754 ZNF80P51504 273 aaPredicted RBP2□□□□□ -2.09
SPG11-218ENST00000559754 GTF2A1P52655 376 aaPredicted RBP2□□□□□ -2.09
SPG11-218ENST00000559754 CDC42P60953 191 aa2□□□□□ -2.09
SPG11-218ENST00000559754 FAM229BQ4G0N7 80 aa2□□□□□ -2.09
SPG11-218ENST00000559754 AMMECR1LQ6DCA0 310 aa2□□□□□ -2.09
SPG11-218ENST00000559754 LCA10Q71F78 164 aa2□□□□□ -2.09
SPG11-218ENST00000559754 HMGN2P46Q86SG4 172 aa2□□□□□ -2.09
SPG11-218ENST00000559754 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
SPG11-218ENST00000559754 LYPD6Q86Y78 171 aa2□□□□□ -2.09
SPG11-218ENST00000559754 C10orf126Q8N4M7 172 aa2□□□□□ -2.09
SPG11-218ENST00000559754 DEDD2Q8WXF8 326 aa2□□□□□ -2.09
SPG11-218ENST00000559754 MAFIPQ8WZ33 124 aa2□□□□□ -2.09
SPG11-218ENST00000559754 RMND5BQ96G75 393 aaPredicted RBP2□□□□□ -2.09
SPG11-218ENST00000559754 CAPZA3Q96KX2 299 aa2□□□□□ -2.09
SPG11-218ENST00000559754 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CCDC32Q9BV29 185 aa2□□□□□ -2.09
SPG11-218ENST00000559754 TUBA4BQ9H853 241 aa2□□□□□ -2.09
SPG11-218ENST00000559754 LAMTOR3Q9UHA4 124 aa2□□□□□ -2.09
SPG11-218ENST00000559754 XIRP1Q702N8 1843 aaKnown RBP2□□□□□ -2.09
SPG11-218ENST00000559754 TRPM6Q9BX84 2022 aa2□□□□□ -2.09
SPG11-218ENST00000559754 WDR90Q96KV7 1748 aa2□□□□□ -2.09
SPG11-218ENST00000559754 CPDO75976 1380 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 GREB1Q4ZG55 1949 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 OBSL1O75147 1896 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 KIF26AQ9ULI4 1882 aaPredicted RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 PLXNB1O43157 2135 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 IGLV2-18A0A075B6J9 118 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 A0A0J9YW62 118 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 DUXBA0A1W2PPF3 345 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 A0A1W2PQD3 144 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 GGT3PA6NGU5 568 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 TRAPPC2LH3BP13 241 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 BUB1B-PAK6H3BSN5 160 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 K7EM74 188 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 IGHV3-7P01780 117 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 UCHL1P09936 223 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 ZNF22P17026 224 aaPredicted RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 GZMHP20718 246 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 S100A4P26447 101 aaKnown RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 HLA-DMBP28068 263 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 TPI1P60174 286 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 YPEL3P61236 119 aaPredicted RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 MOBPQ13875 183 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 RRN3P1Q2M238 152 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 DNLZQ5SXM8 178 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 ZNF705AQ6ZN79 300 aaPredicted RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 OR9Q1Q8NGQ5 310 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 OR2J1Q9GZK6 312 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 OR8D2Q9GZM6 311 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 TXNL4BQ9NX01 149 aaKnown RBP1.99□□□□□ -2.09
SPG11-218ENST00000559754 SPANXCQ9NY87 97 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 TOPBP1Q92547 1522 aa1.99□□□□□ -2.09
SPG11-218ENST00000559754 ARHGEF10O15013 1369 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 COL1A2P08123 1366 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 DOCK4Q8N1I0 1966 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ARL5CA6NH57 179 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ARPC5O15511 151 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 CYB5BO43169 146 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 SYNGR2O43760 224 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 CPSF4O95639 269 aaKnown RBP1.98□□□□□ -2.09
SPG11-218ENST00000559754 FAM107AO95990 144 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 IGKV1-17P01599 117 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 MSMBP08118 114 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 OR10J4P0C629 311 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 SRIP30626 198 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 FLI1Q01543 452 aaPredicted RBP1.98□□□□□ -2.09
SPG11-218ENST00000559754 ZNF141Q15928 474 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 LTC4SQ16873 150 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 IGFL1Q6UW32 110 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ZNF767PQ75MW2 155 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms