RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 Q6ZS49 121 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 PHF13Q86YI8 300 aaPredicted RBP0.22□□□□□ -2.37
CASC4-210ENST00000559550 FAM9CQ8IZT9 166 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 OR51D1Q8NGF3 324 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 OR5A1Q8NGJ0 315 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 MCFD2Q8NI22 146 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 MRPL30Q8TCC3 161 aaKnown RBP0.22□□□□□ -2.37
CASC4-210ENST00000559550 EML6Q6ZMW3 1958 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 ADGRB2O60241 1585 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 APOEP02649 317 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 MIFP14174 115 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 PMAIP1Q13794 54 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 RNASE10Q5GAN6 216 aaKnown RBP0.21□□□□□ -2.38
CASC4-210ENST00000559550 LPCAT4Q643R3 524 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 RPL22L1Q6P5R6 122 aaKnown RBP0.21□□□□□ -2.38
CASC4-210ENST00000559550 FAM151BQ6UXP7 276 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 OR4E2Q8NGC2 313 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 TERB2Q8NHR7 220 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 AMELYQ99218 206 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 GINS4Q9BRT9 223 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 TMEM147Q9BVK8 224 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 ULBP3Q9BZM4 244 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 FGFR1OP2Q9NVK5 253 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 NAV3Q8IVL0 2385 aa0.21□□□□□ -2.38
CASC4-210ENST00000559550 NAV2Q8IVL1 2488 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 TNRC6AQ8NDV7 1962 aaKnown RBP0.2□□□□□ -2.38
CASC4-210ENST00000559550 GOLGA6L19H0YKK7 550 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 INE1O15225 51 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 ZNF25P17030 456 aaPredicted RBP0.2□□□□□ -2.38
CASC4-210ENST00000559550 MAGEA2P43356 314 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 TCL1AP56279 114 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 RAB5BP61020 215 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 HBA1P69905 142 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 KHDC3LQ587J8 217 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 SPANXN5Q5MJ07 72 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 SPATA8Q6RVD6 105 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 IMP4Q96G21 291 aaKnown RBP0.2□□□□□ -2.38
CASC4-210ENST00000559550 ACER3Q9NUN7 267 aa0.2□□□□□ -2.38
CASC4-210ENST00000559550 TOPBP1Q92547 1522 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 FRAS1Q86XX4 4008 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 A0A0A6YYH2 397 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 A0A0D9SG52 128 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 A6NJ64 397 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 EEF1E1-BLOC1S5C9J1V9 151 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 LRRN3E7EW58 273 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 LYZL6O75951 148 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 UBL3O95164 117 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 PRH1P02810 166 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 OCM2P0CE71 109 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 RHOGP84095 191 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 RHEBQ15382 184 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 PDPK2PQ6A1A2 396 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 DPPA3Q6W0C5 159 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 MIR17HGQ75NE6 70 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 LRRC25Q8N386 305 aaPredicted RBP0.19□□□□□ -2.38
CASC4-210ENST00000559550 OR13C4Q8NGS5 318 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 DNAJC9Q8WXX5 260 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 FBXL12Q9NXK8 326 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 RIC1Q4ADV7 1423 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 MED12Q93074 2177 aa0.19□□□□□ -2.38
CASC4-210ENST00000559550 TRAV12-1A0A0B4J245 112 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 A0A1B0GV50 99 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 BUB1B-PAK6H3BSN5 160 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 SLC16A4O15374 487 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 DEXIO95424 95 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 MGST1P10620 155 aaKnown RBP0.18□□□□□ -2.38
CASC4-210ENST00000559550 COX6A1P12074 109 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 TMED1Q13445 227 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 OGFRL1Q5TC84 451 aaPredicted RBP0.18□□□□□ -2.38
CASC4-210ENST00000559550 CD200R1LQ6Q8B3 271 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 TMEM86BQ8N661 226 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 SFT2D1Q8WV19 159 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 H1FXQ92522 213 aaKnown RBP0.18□□□□□ -2.38
CASC4-210ENST00000559550 DRC3Q9H069 523 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 C11orf68Q9H3H3 251 aaKnown RBP0.18□□□□□ -2.38
CASC4-210ENST00000559550 TAS2R4Q9NYW5 299 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 PIK3R4Q99570 1358 aa0.18□□□□□ -2.38
CASC4-210ENST00000559550 SNRNP200O75643 2136 aaKnown RBP0.17□□□□□ -2.38
CASC4-210ENST00000559550 BAALC-AS2P0C853 105 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 SRSF6Q13247 344 aaKnown RBP0.17□□□□□ -2.38
CASC4-210ENST00000559550 DEFB113Q30KQ7 82 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 C1orf137Q5JT78 98 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 SIGLECL1Q8N7X8 197 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 SLC35B4Q969S0 331 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 TMEM70Q9BUB7 260 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 MIXL1Q9H2W2 232 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 C10orf95Q9H7T3 257 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 CDC42SE1Q9NRR8 79 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 ZFC3H1O60293 1989 aaKnown RBP0.17□□□□□ -2.38
CASC4-210ENST00000559550 MCM3APO60318 1980 aa0.17□□□□□ -2.38
CASC4-210ENST00000559550 COL1A1P02452 1464 aaPredicted RBP0.16□□□□□ -2.38
CASC4-210ENST00000559550 TRAV3A0A0B4J244 114 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 PQLC2LA1A4F0 135 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 CLDN25C9JDP6 229 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 KCNK1O00180 336 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 NCR3O14931 201 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 ISG15P05161 165 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 OR5G3P0C626 314 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 CASQ1P31415 396 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 OR52R1Q8NGF1 315 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms