RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 IGHV1-69P01742 117 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 HOXA1P49639 335 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 OR4A47Q6IF82 309 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 LINC00311Q8N616 119 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 C8orf31Q8N9H6 132 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 HEYLQ9NQ87 328 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 RRHO14718 337 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 MPDU1O75352 247 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 IFNA10P01566 189 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 IL6RP08887 468 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 PNRC1Q12796 327 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 BEND2Q8NDZ0 799 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 ST6GALNAC6Q969X2 333 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 SLC25A22Q9H936 323 aa12.72□□□□□ -0.37
CDC42BPB-204ENST00000559043 MTORP42345 2549 aa12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 HIVEP2P31629 2446 aa12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 SAA4P35542 130 aa12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 BCL6BQ8N143 479 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPB-204ENST00000559043 ZNF727A8MUV8 499 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 SEC14L6B5MCN3 397 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 NPFFO15130 113 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 CYB5BO43169 146 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 EIF3GO75821 320 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 HRASP01112 189 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 PRRX1P54821 245 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 CD81P60033 236 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 HSPE1P61604 102 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 RAB24Q969Q5 203 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 MEF2BQ02080 365 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 TREML4Q6UXN2 200 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 C1QL4Q86Z23 238 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 SDF2L1Q9HCN8 221 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 MANBALQ9NQG1 85 aa12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 TEP1Q99973 2627 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-204ENST00000559043 OR10X1Q8NGY0 326 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 IFNA4P05014 189 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 HTR1DP28221 377 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 OPRK1P41145 380 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 REG1BP48304 166 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 PSMB3P49720 205 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 TMEM242Q9NWH2 141 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 ZNF257Q9Y2Q1 563 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 HILPDAQ9Y5L2 63 aa12.69□□□□□ -0.38
CDC42BPB-204ENST00000559043 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 A0A0U1RQK1 487 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 CDC34P49427 236 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 ZNF137PP52743 207 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 ELOBQ15370 118 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 RTL8BQ17RB0 113 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 SLC35D1Q9NTN3 355 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 DPM3Q9P2X0 92 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 LSM4Q9Y4Z0 139 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-204ENST00000559043 C5orf52A6NGY3 159 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 SSX2Q16385 188 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 MGST2Q99735 147 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 MDFIC2A0A1B0GVS7 189 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 INAFM1C9JVW0 142 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 UPK2O00526 184 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 NPY1RP25929 384 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 LGALS4P56470 323 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 Q8WTZ3 238 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 OR51B2Q9Y5P1 312 aa12.67□□□□□ -0.38
CDC42BPB-204ENST00000559043 CUBNO60494 3623 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 SMCO3A2RU48 225 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 YIF1AO95070 293 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 MINOS1Q5TGZ0 78 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 BET1LQ9NYM9 111 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 MINOS1-NBL1R4GNA1 71 aa12.66□□□□□ -0.38
CDC42BPB-204ENST00000559043 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 KBTBD11O94819 623 aa12.65□□□□□ -0.38
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