RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TCL1BO95988 128 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 PMP2P02689 132 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 HTR1AP08908 422 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 DEFA4P12838 97 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 PPIBP23284 216 aaKnown RBP1.73□□□□□ -2.13
CASC4-206ENST00000558847 S100A4P26447 101 aaKnown RBP1.73□□□□□ -2.13
CASC4-206ENST00000558847 HOXA6P31267 233 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 SUPT4H1P63272 117 aaKnown RBP1.73□□□□□ -2.13
CASC4-206ENST00000558847 LIN52Q52LA3 116 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 DPPA3Q6W0C5 159 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 TRAPPC6BQ86SZ2 158 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 DEFB119Q8N690 84 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 OR51A2Q8NGJ7 313 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 SIGMAR1Q99720 223 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 MIXL1Q9H2W2 232 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 COL5A3P25940 1745 aaPredicted RBP1.73□□□□□ -2.13
CASC4-206ENST00000558847 CUL9Q8IWT3 2517 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 FAM236DA0A1B0GTK5 79 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 TRAPPC2LH3BP13 241 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 C8GP07360 202 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 RPSAP08865 295 aaKnown RBP1.72□□□□□ -2.13
CASC4-206ENST00000558847 FAM236CP0DP71 79 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 HSD11B1P28845 292 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 MAGEA12P43365 314 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 YPEL3P61236 119 aaPredicted RBP1.72□□□□□ -2.13
CASC4-206ENST00000558847 MOGQ16653 247 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 C12orf74Q32Q52 190 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 ARHGAP11BQ3KRB8 267 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 TEX36Q5VZQ5 186 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 LINC00471Q8N535 108 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 WFDC11Q8NEX6 87 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 OR4D11Q8NGI4 311 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 PFN4Q8NHR9 129 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 IDI2-AS1Q9NZ38 188 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 PIK3C2GO75747 1445 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 ZFYVE9O95405 1425 aa1.72□□□□□ -2.13
CASC4-206ENST00000558847 TTC21AQ8NDW8 1320 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ITGB4P16144 1822 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 hCG_1818297A0A087WSY0 165 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 A8MT66 165 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ZNF705BP0CI00 300 aaPredicted RBP1.71□□□□□ -2.14
CASC4-206ENST00000558847 COX6A1P12074 109 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 GPX2P18283 190 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 CASP1P29466 404 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 G6PCP35575 357 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ZNF345Q14585 488 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 Q1T7F1 81 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
CASC4-206ENST00000558847 BPIFA4PQ86YQ2 179 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ZNF439Q8NDP4 499 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 TERB2Q8NHR7 220 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ZNF563Q8TA94 476 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 GNPDA2Q8TDQ7 276 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 PSTPIP2Q9H939 334 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 RNF122Q9H9V4 155 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 TVP23BQ9NYZ1 205 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 CYSLTR1Q9Y271 337 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 ERGIC3Q9Y282 383 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 NCKAP5O14513 1909 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 WDR90Q96KV7 1748 aa1.71□□□□□ -2.14
CASC4-206ENST00000558847 NEO1Q92859 1461 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 IGKV1D-43A0A0B4J1Z2 117 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 IBA57-AS1B1ANH7 110 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 ZNF682O95780 498 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 CRPP02741 224 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 ARF6P62330 175 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 RIC1Q4ADV7 1423 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 HIST3H2BBQ8N257 126 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 DNAJC9Q8WXX5 260 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 ZNF625Q96I27 306 aaPredicted RBP1.7□□□□□ -2.14
CASC4-206ENST00000558847 CYSTM1Q9H1C7 97 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 NHP2Q9NX24 153 aaKnown RBP1.7□□□□□ -2.14
CASC4-206ENST00000558847 LHFPL6Q9Y693 200 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 PTPRSQ13332 1948 aa1.7□□□□□ -2.14
CASC4-206ENST00000558847 SMARCA4P51532 1647 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 MALRD1Q5VYJ5 2156 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 RGS12O14924 1447 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 ADGRL3Q9HAR2 1447 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 OR5F1O95221 314 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 NNATQ16517 81 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 KHDC3LQ587J8 217 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 SPANXN5Q5MJ07 72 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 FAM173BQ6P4H8 233 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 Q6Q795 121 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 LCN15Q6UWW0 184 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 OR4E2Q8NGC2 313 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 OR52L1Q8NGH7 329 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 PARVBQ9HBI1 364 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 UQCC1Q9NVA1 299 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 C14orf105Q9NVL8 296 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 TP73-AS1Q9UF72 201 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 ARL5AQ9Y689 179 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 TOPBP1Q92547 1522 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 ROBO3Q96MS0 1386 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 RALGAPA2Q2PPJ7 1873 aa1.69□□□□□ -2.14
CASC4-206ENST00000558847 RTTNQ86VV8 2226 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 SERPINA1P01009 418 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 CST2P09228 141 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 BASP1P80723 227 aaKnown RBP1.68□□□□□ -2.14
CASC4-206ENST00000558847 KISS1Q15726 138 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms