RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 BSCL2Q96G97 398 aaPredicted RBP8.86□□□□□ -0.99
SHF-204ENST00000558685 SCGB3A2Q96PL1 93 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 ATP6V0BQ99437 205 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 MLXQ9UH92 298 aa8.86□□□□□ -0.99
SHF-204ENST00000558685 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
SHF-204ENST00000558685 CYB5BO43169 146 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 MT-CO2P00403 227 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 IFNA17P01571 189 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 FRMD6-AS1P0C7T7 363 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
SHF-204ENST00000558685 ERHP84090 104 aaKnown RBP8.85□□□□□ -0.99
SHF-204ENST00000558685 BSXQ3C1V8 233 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 LYZL2Q7Z4W2 148 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 UXS1Q8NBZ7 420 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 OR2K2Q8NGT1 345 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 OR52E5Q8NH55 327 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 IL22RA2Q969J5 263 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 WDR89Q96FK6 387 aaPredicted RBP8.85□□□□□ -0.99
SHF-204ENST00000558685 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
SHF-204ENST00000558685 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 NDUFA13Q9P0J0 144 aa8.85□□□□□ -0.99
SHF-204ENST00000558685 NBEAL2Q6ZNJ1 2754 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 FAUP35544 74 aaKnown RBP8.84□□□□□ -0.99
SHF-204ENST00000558685 CCR6P51684 374 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 SPCS3P61009 180 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 MLANAQ16655 118 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 Q56UQ5 140 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 LCN12Q6JVE5 192 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 SPSB3Q6PJ21 355 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 TMED4Q7Z7H5 227 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 TMEM61Q8N0U2 210 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 UBAC2Q8NBM4 344 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
SHF-204ENST00000558685 TMEM170AQ8WVE7 144 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 DEDD2Q8WXF8 326 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 FNDC4Q9H6D8 234 aaPredicted RBP8.84□□□□□ -0.99
SHF-204ENST00000558685 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
SHF-204ENST00000558685 KCNIP3Q9Y2W7 256 aa8.84□□□□□ -0.99
SHF-204ENST00000558685 A0A0B4J2A0 478 aa8.83□□□□□ -1
SHF-204ENST00000558685 A8MZ25 164 aa8.83□□□□□ -1
SHF-204ENST00000558685 NDUFA4O00483 81 aa8.83□□□□□ -1
SHF-204ENST00000558685 CD7P09564 240 aa8.83□□□□□ -1
SHF-204ENST00000558685 NHLRC4P0CG21 123 aaPredicted RBP8.83□□□□□ -1
SHF-204ENST00000558685 BTCP35070 178 aa8.83□□□□□ -1
SHF-204ENST00000558685 SNCAP37840 140 aa8.83□□□□□ -1
SHF-204ENST00000558685 HOXA1P49639 335 aaPredicted RBP8.83□□□□□ -1
SHF-204ENST00000558685 MFAP4P55083 255 aa8.83□□□□□ -1
SHF-204ENST00000558685 ELLP55199 621 aaPredicted RBP8.83□□□□□ -1
SHF-204ENST00000558685 ANKRD55Q3KP44 614 aa8.83□□□□□ -1
SHF-204ENST00000558685 TMEM128Q5BJH2 165 aa8.83□□□□□ -1
SHF-204ENST00000558685 ZNF57Q68EA5 555 aaPredicted RBP8.83□□□□□ -1
SHF-204ENST00000558685 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
SHF-204ENST00000558685 PINX1Q96BK5 328 aaKnown RBP8.83□□□□□ -1
SHF-204ENST00000558685 TXN2Q99757 166 aa8.83□□□□□ -1
SHF-204ENST00000558685 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
SHF-204ENST00000558685 TECRQ9NZ01 308 aaKnown RBP8.83□□□□□ -1
SHF-204ENST00000558685 SHPKQ9UHJ6 478 aa8.83□□□□□ -1
SHF-204ENST00000558685 NXPH3O95157 252 aa8.82□□□□□ -1
SHF-204ENST00000558685 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
SHF-204ENST00000558685 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
SHF-204ENST00000558685 PPP1R1AQ13522 171 aa8.82□□□□□ -1
SHF-204ENST00000558685 BTNL8Q6UX41 500 aa8.82□□□□□ -1
SHF-204ENST00000558685 LGI3Q8N145 548 aa8.82□□□□□ -1
SHF-204ENST00000558685 PDCD10Q9BUL8 212 aa8.82□□□□□ -1
SHF-204ENST00000558685 MRPL27Q9P0M9 148 aaKnown RBP8.82□□□□□ -1
SHF-204ENST00000558685 FLVCR2Q9UPI3 526 aa8.82□□□□□ -1
SHF-204ENST00000558685 UFC1Q9Y3C8 167 aa8.82□□□□□ -1
SHF-204ENST00000558685 LINC00854A0A1B0GVQ3 168 aa8.81□□□□□ -1
SHF-204ENST00000558685 A6NHS1 94 aa8.81□□□□□ -1
SHF-204ENST00000558685 K7EMT4 169 aa8.81□□□□□ -1
SHF-204ENST00000558685 PLA2G10O15496 165 aa8.81□□□□□ -1
SHF-204ENST00000558685 ZNF207O43670 478 aaKnown RBP8.81□□□□□ -1
SHF-204ENST00000558685 IL7P13232 177 aa8.81□□□□□ -1
SHF-204ENST00000558685 LRTM2Q8N967 370 aa8.81□□□□□ -1
SHF-204ENST00000558685 MARC2Q969Z3 335 aa8.81□□□□□ -1
SHF-204ENST00000558685 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
SHF-204ENST00000558685 PALMDQ9NP74 551 aa8.81□□□□□ -1
SHF-204ENST00000558685 DAZ1Q9NQZ3 744 aaKnown RBP8.81□□□□□ -1
SHF-204ENST00000558685 C15orf62A8K5M9 175 aa8.8□□□□□ -1
SHF-204ENST00000558685 NUPL2O15504 423 aaKnown RBP8.8□□□□□ -1
SHF-204ENST00000558685 PITX3O75364 302 aa8.8□□□□□ -1
SHF-204ENST00000558685 SCAF4O95104 1147 aaKnown RBP8.8□□□□□ -1
SHF-204ENST00000558685 NDUFB6O95139 128 aa8.8□□□□□ -1
SHF-204ENST00000558685 SFT2D2O95562 160 aa8.8□□□□□ -1
SHF-204ENST00000558685 TMEM50AO95807 157 aa8.8□□□□□ -1
SHF-204ENST00000558685 VAMP1P23763 118 aa8.8□□□□□ -1
SHF-204ENST00000558685 SUB1P53999 127 aaKnown RBP eCLIP8.8□□□□□ -1
SHF-204ENST00000558685 CD81P60033 236 aa8.8□□□□□ -1
SHF-204ENST00000558685 SRPXP78539 464 aa8.8□□□□□ -1
SHF-204ENST00000558685 TNFRSF9Q07011 255 aa8.8□□□□□ -1
SHF-204ENST00000558685 SMCO1Q147U7 214 aa8.8□□□□□ -1
SHF-204ENST00000558685 RBMS2Q15434 407 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms