RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 UBBP0CG47 229 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 TRAPPC2P0DI81 140 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 TRAPPC2BP0DI82 140 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 CD36P16671 472 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 NAT1P18440 290 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 M6PRP20645 277 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 NPPCP23582 126 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 HOXA1P49639 335 aaPredicted RBP6.31□□□□□ -1.4
NEDD1-211ENST00000557454 RASSF2P50749 326 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 Q499Y3 187 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 KCTD21Q4G0X4 260 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 TTC23Q5W5X9 447 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 KDM4DQ6B0I6 523 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 H1FOOQ8IZA3 346 aaPredicted RBP6.31□□□□□ -1.4
NEDD1-211ENST00000557454 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 CIB1Q99828 191 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 TMEM208Q9BTX3 173 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 HINT2Q9BX68 163 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 SPATA2Q9UM82 520 aa6.31□□□□□ -1.4
NEDD1-211ENST00000557454 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 M0QYG6 137 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 FKBP6O75344 327 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 NXPH4O95158 308 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 PPP5CP53041 499 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 RPS11P62280 158 aaKnown RBP eCLIP6.3□□□□□ -1.4
NEDD1-211ENST00000557454 CCDC58Q4VC31 144 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 ACSM3Q53FZ2 586 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 THOC7Q6I9Y2 204 aaKnown RBP6.3□□□□□ -1.4
NEDD1-211ENST00000557454 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 HSD17B13Q7Z5P4 300 aaPredicted RBP6.3□□□□□ -1.4
NEDD1-211ENST00000557454 PQLC1Q8N2U9 271 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 Q8N814 137 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 NKAIN3Q8N8D7 197 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 MOB3AQ96BX8 217 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 SMIM19Q96E16 107 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 DAZAP1Q96EP5 407 aaKnown RBP6.3□□□□□ -1.4
NEDD1-211ENST00000557454 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 METTL26Q96S19 204 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 TXN2Q99757 166 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 SLC29A1Q99808 456 aa6.3□□□□□ -1.4
NEDD1-211ENST00000557454 FOXI3A8MTJ6 420 aaPredicted RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 TMEM14DPA8MWL7 114 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 ZNF701M0R085 212 aaPredicted RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 DENRO43583 198 aaKnown RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 DIRAS3O95661 229 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 MT-CO2P00403 227 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 FCGR3AP08637 254 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 CD37P11049 281 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 CRYBB3P26998 211 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 NKX2-1P43699 371 aaPredicted RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 QRFPP83859 136 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 LSM10Q969L4 123 aaKnown RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 HSD17B10Q99714 261 aaKnown RBP6.29□□□□□ -1.4
NEDD1-211ENST00000557454 PECRQ9BY49 303 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 LPAR5Q9H1C0 372 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 TAS2R8Q9NYW2 309 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 CRCT1Q9UGL9 99 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 TAGLN3Q9UI15 199 aa6.29□□□□□ -1.4
NEDD1-211ENST00000557454 IGKV1D-13A0A0B4J2D9 117 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 TEX50A0A1B0GTY4 177 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 SAC3D1A6NKF1 404 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 IGKV1-13P0DP09 117 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 DCKP27707 260 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 EIF2B2P49770 351 aaKnown RBP6.28□□□□□ -1.4
NEDD1-211ENST00000557454 TMEM50BP56557 158 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 RPL37AP61513 92 aaKnown RBP6.28□□□□□ -1.4
NEDD1-211ENST00000557454 PSG9Q00887 426 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 SSX1Q16384 188 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 CADM3Q8N126 398 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
NEDD1-211ENST00000557454 GABARAPL3Q9BY60 117 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 DCSTAMPQ9H295 470 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 SAV1Q9H4B6 383 aaPredicted RBP6.28□□□□□ -1.4
NEDD1-211ENST00000557454 NDUFA4L2Q9NRX3 87 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 TMEM140Q9NV12 185 aa6.28□□□□□ -1.4
NEDD1-211ENST00000557454 AQP12BA6NM10 295 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 OGG1O15527 345 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 LIMS3P0CW19 117 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 LIMS4P0CW20 117 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 AZU1P20160 251 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 HOXA5P20719 270 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 MEDAGQ5VYS4 303 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 AQP12AQ8IXF9 295 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 OR1L8Q8NGR8 309 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 OR1P1Q8NH06 330 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 TRUB1Q8WWH5 349 aaKnown RBP6.27□□□□□ -1.41
NEDD1-211ENST00000557454 PINX1Q96BK5 328 aaKnown RBP6.27□□□□□ -1.41
NEDD1-211ENST00000557454 DERL3Q96Q80 235 aa6.27□□□□□ -1.41
NEDD1-211ENST00000557454 SEPSECSQ9HD40 501 aaKnown RBP6.27□□□□□ -1.41
NEDD1-211ENST00000557454 AMBNQ9NP70 447 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms