RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SIGLECL1Q8N7X8 197 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 PHYHIPLQ96FC7 376 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 UQCC1Q9NVA1 299 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 CORTO00230 105 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 RGS13O14921 159 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 IFNA5P01569 189 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 CRYGCP07315 174 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 EGR2P11161 476 aaPredicted RBP18.72■□□□□ 0.59
SIX4-203ENST00000556952 SRSF2Q01130 221 aaKnown RBP18.72■□□□□ 0.59
SIX4-203ENST00000556952 OR1L6Q8NGR2 347 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 TMEM68Q96MH6 324 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 PARD6GQ9BYG4 376 aaPredicted RBP18.72■□□□□ 0.59
SIX4-203ENST00000556952 ARV1Q9H2C2 271 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 PARP11Q9NR21 331 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 FBXO7Q9Y3I1 522 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 FNDC10F2Z333 226 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 ATP6V0E1O15342 81 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 IFNA7P01567 189 aa18.72■□□□□ 0.59
SIX4-203ENST00000556952 TSPAN9O75954 239 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 CFDP00746 253 aaPredicted RBP18.71■□□□□ 0.59
SIX4-203ENST00000556952 ASPHD1Q5U4P2 390 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 RBMS3Q6XE24 437 aaKnown RBP18.71■□□□□ 0.59
SIX4-203ENST00000556952 ZNF767PQ75MW2 155 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 TTC9CQ8N5M4 171 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 ZNF680Q8NEM1 530 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 GINS3Q9BRX5 216 aa18.71■□□□□ 0.59
SIX4-203ENST00000556952 SH2D7A6NKC9 451 aaPredicted RBP18.7■□□□□ 0.58
SIX4-203ENST00000556952 IGHG2P01859 326 aa18.7■□□□□ 0.58
SIX4-203ENST00000556952 CRIP2P52943 208 aaPredicted RBP18.7■□□□□ 0.58
SIX4-203ENST00000556952 SLC25A24Q6NUK1 477 aa18.7■□□□□ 0.58
SIX4-203ENST00000556952 LFNGQ8NES3 379 aa18.7■□□□□ 0.58
SIX4-203ENST00000556952 FBN1P35555 2871 aaKnown RBP18.7■□□□□ 0.58
SIX4-203ENST00000556952 UBE2L5PA0A1B0GUS4 154 aa18.69■□□□□ 0.58
SIX4-203ENST00000556952 FBXO24O75426 580 aa18.69■□□□□ 0.58
SIX4-203ENST00000556952 CD69Q07108 199 aa18.69■□□□□ 0.58
SIX4-203ENST00000556952 EXOSC2Q13868 293 aaKnown RBP18.69■□□□□ 0.58
SIX4-203ENST00000556952 EIF5AL1Q6IS14 154 aaKnown RBP18.69■□□□□ 0.58
SIX4-203ENST00000556952 CACNG8Q8WXS5 425 aa18.69■□□□□ 0.58
SIX4-203ENST00000556952 WNT10AQ9GZT5 417 aa18.69■□□□□ 0.58
SIX4-203ENST00000556952 CYB5BO43169 146 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 DEFA4P12838 97 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 GPX4P36969 197 aaPredicted RBP18.68■□□□□ 0.58
SIX4-203ENST00000556952 AKIRIN2Q53H80 203 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 SLC35E3Q7Z769 313 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 SCGB1C1Q8TD33 95 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 WDR61Q9GZS3 305 aaKnown RBP18.68■□□□□ 0.58
SIX4-203ENST00000556952 IGF1P05019 195 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 MFAP2P55001 183 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 C9orf152Q5JTZ5 239 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 TNFRSF19Q9NS68 423 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 UBQLN2Q9UHD9 624 aa18.68■□□□□ 0.58
SIX4-203ENST00000556952 TCF21O43680 179 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 OPRK1P41145 380 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 BLCAPP62952 87 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 ARSJQ5FYB0 599 aaPredicted RBP18.67■□□□□ 0.58
SIX4-203ENST00000556952 ETFRF1Q6IPR1 90 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 UNQ5815/PRO19632Q6UWF5 114 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 ALKAL2Q6UX46 152 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 HSD17B11Q8NBQ5 300 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 FAM110DQ8TAY7 271 aaPredicted RBP18.67■□□□□ 0.58
SIX4-203ENST00000556952 SCARB1Q8WTV0 552 aa18.67■□□□□ 0.58
SIX4-203ENST00000556952 GNPNAT1Q96EK6 184 aaPredicted RBP18.67■□□□□ 0.58
SIX4-203ENST00000556952 RPS10-NUDT3A0A1W2PQS6 291 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 ECSCRQ19T08 205 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 C19orf35Q6ZS72 473 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 SLC16A13Q7RTY0 426 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 ZNF418Q8TF45 676 aaPredicted RBP18.66■□□□□ 0.58
SIX4-203ENST00000556952 TAF15Q92804 592 aaKnown RBP eCLIP18.66■□□□□ 0.58
SIX4-203ENST00000556952 MISP3Q96FF7 219 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 NPVFQ9HCQ7 196 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 ESM1Q9NQ30 184 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 ZNF580Q9UK33 172 aa18.66■□□□□ 0.58
SIX4-203ENST00000556952 SMCO3A2RU48 225 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 LINC01548A6NM66 108 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 MPDU1O75352 247 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 SEC11BP0C7V7 166 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 SPP1P10451 314 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 MDKP21741 143 aaPredicted RBP18.65■□□□□ 0.58
SIX4-203ENST00000556952 SLC35E1Q96K37 410 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 NPFFR1Q9GZQ6 430 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 WDR83OSQ9Y284 106 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 DMRT1Q9Y5R6 373 aa18.65■□□□□ 0.58
SIX4-203ENST00000556952 ATP6V0CP27449 155 aa18.64■□□□□ 0.58
SIX4-203ENST00000556952 HILS1P60008 231 aa18.64■□□□□ 0.58
SIX4-203ENST00000556952 TREML4Q6UXN2 200 aa18.64■□□□□ 0.58
SIX4-203ENST00000556952 IGLV11-55A0A075B6I3 123 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 TRAV41A0A0B4J266 112 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 AP4M1O00189 453 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 FGF7P21781 194 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 AKR1C1Q04828 323 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 KLK9Q2XQG4 91 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 C19orf54Q5BKX5 351 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 TMED6Q8WW62 240 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 FNDC4Q9H6D8 234 aaPredicted RBP18.64■□□□□ 0.57
SIX4-203ENST00000556952 KLK9Q9UKQ9 250 aa18.64■□□□□ 0.57
SIX4-203ENST00000556952 HIST1H1BP16401 226 aaKnown RBP18.63■□□□□ 0.57
SIX4-203ENST00000556952 GAMTQ14353 236 aa18.63■□□□□ 0.57
SIX4-203ENST00000556952 PSMG3Q9BT73 122 aaPredicted RBP18.63■□□□□ 0.57
SIX4-203ENST00000556952 SLC25A32Q9H2D1 315 aa18.63■□□□□ 0.57
SIX4-203ENST00000556952 THYN1Q9P016 225 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms