RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PXMP4Q9Y6I8 212 aa3.62□□□□□ -1.83
ATXN3-241ENST00000556374 FN1P02751 2386 aaKnown RBP3.62□□□□□ -1.83
ATXN3-241ENST00000556374 RTTNQ86VV8 2226 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TRGV8A0A0C4DH27 118 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 A0A0U1RQK1 487 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF320A2RRD8 509 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 MBD3L4A6NDZ8 208 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 MBD3L3A6NE82 208 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 NKX6-3A6NJ46 265 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF705FA8MVS1 300 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 MKRN2OSH3BPM6 223 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SLC31A2O15432 143 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RBFOX2O43251 390 aaKnown RBP eCLIP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNHIT1O43257 154 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RAMP3O60896 148 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 FCGR3BO75015 233 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SCGB1D1O95968 90 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF705DP0CH99 300 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF705BP0CI00 300 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 IRF2P14316 349 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 GZMHP20718 246 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 IGHV1-2P23083 117 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TNFSF4P23510 183 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 NPY1RP25929 384 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 IL3RAP26951 378 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 CD82P27701 267 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 OR10J1P30954 320 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SSTR5P35346 364 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 EDDM3BP56851 147 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TIRAPP58753 221 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 LINC00205P59089 165 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TAS2R45P59539 299 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TAS2R60P59551 318 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RANP62826 216 aaKnown RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF90Q03938 601 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 AESQ08117 197 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 PSG7Q13046 419 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RTL8BQ17RB0 113 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TMEM183BQ1AE95 376 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 TMEM249Q2WGJ8 235 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 COX19Q49B96 90 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SPINK9Q5DT21 86 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RUSC1-AS1Q66K80 236 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 WDR73Q6P4I2 378 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 RPP25LQ8N5L8 163 aaKnown RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 NRACQ8N912 160 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SLC24A4Q8NFF2 622 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 OR10G8Q8NGN5 311 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 OR52E5Q8NH55 327 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 CMTM2Q8TAZ6 248 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 KLF14Q8TD94 323 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 WDYHV1Q96HA8 205 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SFRP2Q96HF1 295 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 PYGO2Q9BRQ0 406 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 PCGF1Q9BSM1 259 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 NDUFAF3Q9BU61 184 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SAMD10Q9BYL1 202 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ZDHHC11Q9H8X9 412 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 FKBP11Q9NYL4 201 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 PROCRQ9UNN8 238 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 ARL2-SNX15V9GYD0 113 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 CSPG4Q6UVK1 2322 aa3.61□□□□□ -1.83
ATXN3-241ENST00000556374 NIPBLQ6KC79 2804 aaeCLIP3.61□□□□□ -1.83
ATXN3-241ENST00000556374 CACNA1CQ13936 2221 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 PKDREJQ9NTG1 2253 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 TRGV10A0A0A0MS01 117 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 TRBV9A0A0B4J1U6 114 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IGHV3-43A0A0B4J1X8 118 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IGHV3-64DA0A0J9YX35 117 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IFITM10A6NMD0 228 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 C15orf62A8K5M9 175 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 C17orf98A8MV24 154 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 WNT9BO14905 357 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 MLNRO43193 412 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 YPEL1O60688 119 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 TOMM40O96008 361 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IGKV1D-33P01593 117 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IGKV1-33P01594 117 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 CRYAAP02489 173 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 APOA2P02652 100 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 AMBPP02760 352 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 MT-ND6P03923 174 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 PFN1P07737 140 aaKnown RBP3.6□□□□□ -1.83
ATXN3-241ENST00000556374 P0C879 139 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 ARL14EPLP0DKL9 152 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 IGHV3-43DP0DP04 118 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 MDKP21741 143 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-241ENST00000556374 PRDX2P32119 198 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 MPV17P39210 176 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 ATP5G3P48201 142 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 PDLIM4P50479 330 aa3.6□□□□□ -1.83
ATXN3-241ENST00000556374 RPS16P62249 146 aaKnown RBP3.6□□□□□ -1.83
ATXN3-241ENST00000556374 P2RY6Q15077 328 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms