RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ERHP84090 104 aaKnown RBP13.85□□□□□ -0.19
CDKN3-209ENST00000556102 GATAD1Q8WUU5 269 aa13.85□□□□□ -0.19
CDKN3-209ENST00000556102 PINX1Q96BK5 328 aaKnown RBP13.85□□□□□ -0.19
CDKN3-209ENST00000556102 GINS3Q9BRX5 216 aa13.85□□□□□ -0.19
CDKN3-209ENST00000556102 COMMD3Q9UBI1 195 aa13.85□□□□□ -0.19
CDKN3-209ENST00000556102 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 IGHV3OR16-13A0A075B7E8 117 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 A0A087WXM4 84 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 IGHV3-74A0A0B4J1X5 117 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 IGHV3-48P01763 117 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 CD5P06127 495 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 SNX29P2Q8IUI4 249 aa13.84□□□□□ -0.19
CDKN3-209ENST00000556102 PHLDA1Q8WV24 401 aaPredicted RBP13.84□□□□□ -0.19
CDKN3-209ENST00000556102 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
CDKN3-209ENST00000556102 TCF24Q7RTU0 167 aa13.83□□□□□ -0.2
CDKN3-209ENST00000556102 GBGT1Q8N5D6 347 aa13.83□□□□□ -0.2
CDKN3-209ENST00000556102 NPBWR1P48145 328 aa13.82□□□□□ -0.2
CDKN3-209ENST00000556102 TOMM20LQ6UXN7 152 aa13.82□□□□□ -0.2
CDKN3-209ENST00000556102 RARRES2Q99969 163 aa13.82□□□□□ -0.2
CDKN3-209ENST00000556102 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
CDKN3-209ENST00000556102 M0QYG6 137 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 RND3P61587 244 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 NCS1P62166 190 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 IZUMO4Q1ZYL8 232 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 SPINK9Q5DT21 86 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 DUSP18Q8NEJ0 188 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 ST8SIA2Q92186 375 aa13.81□□□□□ -0.2
CDKN3-209ENST00000556102 C11orf68Q9H3H3 251 aaKnown RBP13.81□□□□□ -0.2
CDKN3-209ENST00000556102 ST8SIA3O43173 380 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 IGKV1-5P01602 117 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 ELK1P19419 428 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 SNCAP37840 140 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 ZNF600Q6ZNG1 722 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 SLC35G3Q8N808 338 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 ZNF486Q96H40 463 aaPredicted RBP13.8□□□□□ -0.2
CDKN3-209ENST00000556102 MFFQ9GZY8 342 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 ZFAND3Q9H8U3 227 aa13.8□□□□□ -0.2
CDKN3-209ENST00000556102 TRAV2A0A0B4J234 112 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 INS-IGF2F8WCM5 200 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 DNASE2O00115 360 aaPredicted RBP13.79□□□□□ -0.2
CDKN3-209ENST00000556102 HPGDSO60760 199 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 DFFBO76075 338 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 TNFAIP8O95379 198 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 APOHP02749 345 aaPredicted RBP13.79□□□□□ -0.2
CDKN3-209ENST00000556102 P0C879 139 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 PGAM2P15259 253 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 AKR1C2P52895 323 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 VBP1P61758 197 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 LGALS9CQ6DKI2 356 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
CDKN3-209ENST00000556102 C11orf45Q8TAV5 145 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 FUNDC2Q9BWH2 189 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 MS4A6AQ9H2W1 248 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 PUS1Q9Y606 427 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDKN3-209ENST00000556102 DNAH10Q8IVF4 4471 aa13.79□□□□□ -0.2
CDKN3-209ENST00000556102 A0A0B4J293 547 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 CORTO00230 105 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 ATG12O94817 140 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 TMEM50AO95807 157 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
CDKN3-209ENST00000556102 PI3P19957 117 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 PIGPP57054 158 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 NANOS2P60321 138 aaKnown RBP13.78□□□□□ -0.2
CDKN3-209ENST00000556102 RNASE10Q5GAN6 216 aaKnown RBP13.78□□□□□ -0.2
CDKN3-209ENST00000556102 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 LHFPL1Q86WI0 220 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 LILRB2Q8N423 598 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 TP53RKQ96S44 253 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 TMEM231Q9H6L2 316 aa13.78□□□□□ -0.2
CDKN3-209ENST00000556102 IGHV3-66A0A0C4DH42 116 aa13.77□□□□□ -0.21
CDKN3-209ENST00000556102 IFNA17P01571 189 aa13.77□□□□□ -0.21
CDKN3-209ENST00000556102 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDKN3-209ENST00000556102 DEFB131AP59861 70 aa13.77□□□□□ -0.21
CDKN3-209ENST00000556102 RBMS2Q15434 407 aaKnown RBP13.77□□□□□ -0.21
CDKN3-209ENST00000556102 ARRDC1Q8N5I2 433 aa13.77□□□□□ -0.21
CDKN3-209ENST00000556102 PDCD10Q9BUL8 212 aa13.77□□□□□ -0.21
CDKN3-209ENST00000556102 AGRNO00468 2067 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 A0A1B0GU03 582 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 FAM25AB3EWG3 89 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 FAM25CB3EWG5 89 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 FAM25GB3EWG6 89 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 DEDDO75618 318 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 IFNA4P05014 189 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
CDKN3-209ENST00000556102 HOXA1P49639 335 aaPredicted RBP13.76□□□□□ -0.21
CDKN3-209ENST00000556102 RORCP51449 518 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 RPL11P62913 178 aaKnown RBP13.76□□□□□ -0.21
CDKN3-209ENST00000556102 TMEM187Q14656 261 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 RNASE12Q5GAN4 147 aaKnown RBP13.76□□□□□ -0.21
CDKN3-209ENST00000556102 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 KLK11Q9UBX7 282 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 FBXL17Q9UF56 701 aa13.76□□□□□ -0.21
CDKN3-209ENST00000556102 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
CDKN3-209ENST00000556102 A0A1W2PS18 150 aa13.75□□□□□ -0.21
CDKN3-209ENST00000556102 CD3DP04234 171 aa13.75□□□□□ -0.21
CDKN3-209ENST00000556102 NPPCP23582 126 aa13.75□□□□□ -0.21
CDKN3-209ENST00000556102 MZT2AQ6P582 158 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms