RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 SCGB2A1O75556 95 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 MT-CO2P00403 227 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 PMP2P02689 132 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 PRCDQ00LT1 54 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 STHQ8IWL8 128 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 DUSP18Q8NEJ0 188 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 FXYD6Q9H0Q3 95 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 HRH4Q9H3N8 390 aa12.41□□□□□ -0.42
XRCC3-215ENST00000555964 NAT1P18440 290 aa12.4□□□□□ -0.42
XRCC3-215ENST00000555964 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
XRCC3-215ENST00000555964 PINX1Q96BK5 328 aaKnown RBP12.4□□□□□ -0.42
XRCC3-215ENST00000555964 RNF167Q9H6Y7 350 aa12.4□□□□□ -0.42
XRCC3-215ENST00000555964 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
XRCC3-215ENST00000555964 A0A1W2PS18 150 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 PRSS3P35030 304 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 TSPAN5P62079 268 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 PHLDA2Q53GA4 152 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 MS4A6AQ9H2W1 248 aa12.39□□□□□ -0.43
XRCC3-215ENST00000555964 AGRNO00468 2067 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 IGHV3OR16-13A0A075B7E8 117 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 IGHV3-74A0A0B4J1X5 117 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 DBX1A6NMT0 343 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 IGLL5B9A064 214 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 CORTO00230 105 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 HRH1P35367 487 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 TAS2R20P59543 309 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 DEFB131AP59861 70 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 HSPE1P61604 102 aaKnown RBP12.38□□□□□ -0.43
XRCC3-215ENST00000555964 TOMM20LQ6UXN7 152 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
XRCC3-215ENST00000555964 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
XRCC3-215ENST00000555964 SPP1P10451 314 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 MIFP14174 115 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 SNCAP37840 140 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
XRCC3-215ENST00000555964 LEMD1Q68G75 181 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-215ENST00000555964 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 SAMD12Q8N8I0 201 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
XRCC3-215ENST00000555964 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
XRCC3-215ENST00000555964 DEFB4AO15263 64 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 ATG12O94817 140 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 KCTD21Q4G0X4 260 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 LINC00336Q6ZUF6 198 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 Q8NAQ8 132 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 METTL26Q96S19 204 aa12.36□□□□□ -0.43
XRCC3-215ENST00000555964 IGHV3-48P01763 117 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 NPPCP23582 126 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 HLA-DMAP28067 261 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 EIF2B2P49770 351 aaKnown RBP12.35□□□□□ -0.43
XRCC3-215ENST00000555964 UCP3P55916 312 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PRR20EP86478 221 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PRR20CP86479 221 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PRR20DP86480 221 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PRR20BP86481 221 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PRR20AP86496 221 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 NEDD8Q15843 81 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 ZFAND3Q9H8U3 227 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 SCPEP1Q9HB40 452 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
XRCC3-215ENST00000555964 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
XRCC3-215ENST00000555964 SMIM31A0A1B0GVY4 71 aa12.34□□□□□ -0.43
XRCC3-215ENST00000555964 INS-IGF2F8WCM5 200 aa12.34□□□□□ -0.43
XRCC3-215ENST00000555964 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 IGHV3-66A0A0C4DH42 116 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 TRPT1Q86TN4 253 aaKnown RBP12.33□□□□□ -0.44
XRCC3-215ENST00000555964 STXBP6Q8NFX7 210 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 ENY2Q9NPA8 101 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 HECTD4Q9Y4D8 3996 aa12.33□□□□□ -0.44
XRCC3-215ENST00000555964 DNAH6Q9C0G6 4158 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-215ENST00000555964 TMEM50AO95807 157 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 IFNA17P01571 189 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 APOHP02749 345 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-215ENST00000555964 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 HLA-DMBP28068 263 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 RCVRNP35243 200 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 AKR1C2P52895 323 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 LYSMD2Q8IV50 215 aa12.32□□□□□ -0.44
XRCC3-215ENST00000555964 ZNF486Q96H40 463 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-215ENST00000555964 K7EQG2 157 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 OPRK1P41145 380 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 P2RY1P47900 373 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
XRCC3-215ENST00000555964 PVRIGQ6DKI7 326 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 LILRB2Q8N423 598 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 RNF126Q9BV68 326 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms