RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 C7orf71A4D174 169 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 MLNRO43193 412 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF497Q6ZNH5 498 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 MRPL18Q9H0U6 180 aaKnown RBP6.83□□□□□ -1.32
SYNE2-220ENST00000555612 FHITP49789 147 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF600Q6ZNG1 722 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 OR11H4Q8NGC9 324 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF236Q9UL36 1845 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 PIKFYVEQ9Y2I7 2098 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 TRBV6-7A0A0A0MS04 114 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 DUSP14O95147 198 aaKnown RBP6.83□□□□□ -1.32
SYNE2-220ENST00000555612 LINC00271P0C7V0 271 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 PAX1P15863 534 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 COL8A2P25067 703 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 C2orf68Q2NKX9 166 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 NHLRC3Q5JS37 347 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 REC114Q7Z4M0 266 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 RNF125Q96EQ8 232 aa6.83□□□□□ -1.32
SYNE2-220ENST00000555612 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 RND3P61587 244 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 MIR17HGQ75NE6 70 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF256Q9Y2P7 627 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 TRAV20A0A0B4J274 112 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 COX6CP09669 75 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 IGHV1-8P0DP01 117 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 UCP1P25874 307 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF329Q86UD4 541 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ALKBH7Q9BT30 221 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 PATJQ8NI35 1801 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 PRB4P10163 310 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 RPL35AP18077 110 aaKnown RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 SRIP30626 198 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 H2BFSP57053 126 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 EFNB1P98172 346 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 KIR3DL3Q8N743 410 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 PARLQ9H300 379 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 Q9H3A6 140 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF319Q9P2F9 582 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 MTCL1Q9Y4B5 1905 aaKnown RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF474Q6S9Z5 364 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 HSPB9Q9BQS6 159 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 IGKV1-9A0A0C4DH69 117 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 CRPP02741 224 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 MALP21145 153 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 ARTNQ5T4W7 220 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 CACNG8Q8WXS5 425 aa6.82□□□□□ -1.32
SYNE2-220ENST00000555612 SNRNP200O75643 2136 aaKnown RBP6.82□□□□□ -1.32
SYNE2-220ENST00000555612 SRRM5B3KS81 715 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 PEX7O00628 323 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 RAMP3O60896 148 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF25P17030 456 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-220ENST00000555612 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 ARID2Q68CP9 1835 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 VGLL1Q99990 258 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 GGACTQ9BVM4 153 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 C15orf61A6NNL5 157 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 AGAP20933 346 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 TPTE2P1Q5T6R2 138 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 LCNL1Q6ZST4 164 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 PLSCR2Q9NRY7 297 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 SDK2Q58EX2 2172 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 A0A087WV48 116 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 SHISA3A0PJX4 238 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 DPRXA6NFQ7 191 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 SMIM6P0DI80 62 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 TNFRSF14Q92956 283 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 CCDC88CQ9P219 2028 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 IGHG3P01860 377 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 SLC50A1Q9BRV3 221 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 CRYGSP22914 178 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 GPX4P36969 197 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-220ENST00000555612 NBL1P41271 181 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 FAM209BQ5JX69 171 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 ZNF660Q6AZW8 331 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-220ENST00000555612 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 A6NJY4 79 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 C15orf32Q32M92 178 aa6.81□□□□□ -1.32
SYNE2-220ENST00000555612 PSMG3Q9BT73 122 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-220ENST00000555612 RPUSD1Q9UJJ7 312 aaKnown RBP6.81□□□□□ -1.32
SYNE2-220ENST00000555612 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-220ENST00000555612 C10orf55Q5SWW7 151 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 OR10S1Q8NGN2 331 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 OR10AG1Q8NH19 301 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 HIST1H4GQ99525 98 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 IGHV1-3A0A0C4DH29 117 aa6.8□□□□□ -1.32
SYNE2-220ENST00000555612 RIPPLY3P57055 190 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms