RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ZNF414Q96IQ9 312 aa16.35■□□□□ 0.21
GABRB3-206ENST00000554556 SEC22AQ96IW7 307 aa16.35■□□□□ 0.21
GABRB3-206ENST00000554556 RPS19P39019 145 aaKnown RBP16.34■□□□□ 0.21
GABRB3-206ENST00000554556 NPBWR1P48145 328 aa16.34■□□□□ 0.21
GABRB3-206ENST00000554556 KCTD21Q4G0X4 260 aa16.34■□□□□ 0.21
GABRB3-206ENST00000554556 C11orf68Q9H3H3 251 aaKnown RBP16.34■□□□□ 0.21
GABRB3-206ENST00000554556 IGHV3OR16-13A0A075B7E8 117 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 IGHV3-74A0A0B4J1X5 117 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 DNASE2O00115 360 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-206ENST00000554556 DFFBO76075 338 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 UCP3P55916 312 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 DUSP18Q8NEJ0 188 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 FBXL17Q9UF56 701 aa16.33■□□□□ 0.2
GABRB3-206ENST00000554556 ST8SIA3O43173 380 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 DEDDO75618 318 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 IGHV3-48P01763 117 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 TGFBR1P36897 503 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 NANOS2P60321 138 aaKnown RBP16.32■□□□□ 0.2
GABRB3-206ENST00000554556 TOMM20LQ6UXN7 152 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 GPX8Q8TED1 209 aa16.32■□□□□ 0.2
GABRB3-206ENST00000554556 CA1P00915 261 aaPredicted RBP16.31■□□□□ 0.2
GABRB3-206ENST00000554556 SNCAP37840 140 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 TCTAP57738 103 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 RPL11P62913 178 aaKnown RBP16.31■□□□□ 0.2
GABRB3-206ENST00000554556 TMEM187Q14656 261 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 ZNF600Q6ZNG1 722 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 MRGPRFQ96AM1 343 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 TMEM231Q9H6L2 316 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 VSIRQ9H7M9 311 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 SCPEP1Q9HB40 452 aa16.31■□□□□ 0.2
GABRB3-206ENST00000554556 TRAV2A0A0B4J234 112 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 IGKV1-39P01597 117 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 IGKV1D-39P04432 117 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 LSM3P62310 102 aaKnown RBP16.3■□□□□ 0.2
GABRB3-206ENST00000554556 C2CD4CQ8TF44 421 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 ST8SIA2Q92186 375 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 MS4A6AQ9H2W1 248 aa16.3■□□□□ 0.2
GABRB3-206ENST00000554556 RCVRNP35243 200 aa16.29■□□□□ 0.2
GABRB3-206ENST00000554556 DEFB131AP59861 70 aa16.29■□□□□ 0.2
GABRB3-206ENST00000554556 VCX3AQ9NNX9 186 aa16.29■□□□□ 0.2
GABRB3-206ENST00000554556 CORTO00230 105 aa16.28■□□□□ 0.2
GABRB3-206ENST00000554556 APOA1P02647 267 aa16.28■□□□□ 0.2
GABRB3-206ENST00000554556 SUB1P53999 127 aaKnown RBP eCLIP16.28■□□□□ 0.2
GABRB3-206ENST00000554556 STHQ8IWL8 128 aa16.28■□□□□ 0.2
GABRB3-206ENST00000554556 YIPF6Q96EC8 236 aa16.28■□□□□ 0.2
GABRB3-206ENST00000554556 COMMD3Q9UBI1 195 aa16.28■□□□□ 0.2
GABRB3-206ENST00000554556 PUS1Q9Y606 427 aaKnown RBP eCLIP16.28■□□□□ 0.2
GABRB3-206ENST00000554556 A0A1W2PS18 150 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 ATG12O94817 140 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 TMEM50AO95807 157 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 APOHP02749 345 aaPredicted RBP16.27■□□□□ 0.2
GABRB3-206ENST00000554556 NPPCP23582 126 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 LEMD1Q68G75 181 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 SNX29P2Q8IUI4 249 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 SLC35G3Q8N808 338 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 PDCD10Q9BUL8 212 aa16.27■□□□□ 0.2
GABRB3-206ENST00000554556 INS-IGF2F8WCM5 200 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 SCGB2A1O75556 95 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 IFNA17P01571 189 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 TMEM41BQ5BJD5 291 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 LILRB2Q8N423 598 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 ZNF486Q96H40 463 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-206ENST00000554556 ZFAND3Q9H8U3 227 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 RABAC1Q9UI14 185 aa16.26■□□□□ 0.19
GABRB3-206ENST00000554556 IGHV3-66A0A0C4DH42 116 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 C11orf94C9JXX5 98 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 DEFB4AO15263 64 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 PGAM2P15259 253 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 RND3P61587 244 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 SPINK9Q5DT21 86 aa16.25■□□□□ 0.19
GABRB3-206ENST00000554556 AKR1C2P52895 323 aa16.24■□□□□ 0.19
GABRB3-206ENST00000554556 IZUMO4Q1ZYL8 232 aa16.24■□□□□ 0.19
GABRB3-206ENST00000554556 NARS2Q96I59 477 aaKnown RBP16.24■□□□□ 0.19
GABRB3-206ENST00000554556 ENY2Q9NPA8 101 aa16.24■□□□□ 0.19
GABRB3-206ENST00000554556 A0A087WXM4 84 aa16.23■□□□□ 0.19
GABRB3-206ENST00000554556 MORN3Q6PF18 240 aaPredicted RBP16.23■□□□□ 0.19
GABRB3-206ENST00000554556 CENPSQ8N2Z9 138 aa16.23■□□□□ 0.19
GABRB3-206ENST00000554556 METTL26Q96S19 204 aa16.23■□□□□ 0.19
GABRB3-206ENST00000554556 HRH4Q9H3N8 390 aa16.23■□□□□ 0.19
GABRB3-206ENST00000554556 KMT2AQ03164 3969 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 A0A1B0GU03 582 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 IGLL5B9A064 214 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 M0QYG6 137 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 IGKV1-5P01602 117 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 PIGPP57054 158 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 PVRIGQ6DKI7 326 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 FAM24BQ8N5W8 94 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 TMEM230Q96A57 120 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 GRAMD2BQ96HH9 432 aa16.22■□□□□ 0.19
GABRB3-206ENST00000554556 A0A0B4J293 547 aa16.21■□□□□ 0.19
GABRB3-206ENST00000554556 CLN5O75503 358 aa16.21■□□□□ 0.19
GABRB3-206ENST00000554556 RNASE2P10153 161 aaKnown RBP16.21■□□□□ 0.19
GABRB3-206ENST00000554556 SPP1P10451 314 aa16.21■□□□□ 0.19
GABRB3-206ENST00000554556 HOXA1P49639 335 aaPredicted RBP16.21■□□□□ 0.19
GABRB3-206ENST00000554556 RNASE10Q5GAN6 216 aaKnown RBP16.21■□□□□ 0.19
GABRB3-206ENST00000554556 STXBP6Q8NFX7 210 aa16.21■□□□□ 0.19
GABRB3-206ENST00000554556 TP53RKQ96S44 253 aa16.21■□□□□ 0.19
GABRB3-206ENST00000554556 AGRNO00468 2067 aa16.2■□□□□ 0.18
GABRB3-206ENST00000554556 TRAV30A0A087WSZ9 112 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms