RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 XCL2Q9UBD3 114 aa4.82□□□□□ -1.64
PCNX4-208ENST00000554534 PUS1Q9Y606 427 aaKnown RBP eCLIP4.82□□□□□ -1.64
PCNX4-208ENST00000554534 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
PCNX4-208ENST00000554534 IGHV3OR16-12A0A075B7B8 117 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 MARCH11A6NNE9 402 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 C15orf61A6NNL5 157 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 NOTOA8MTQ0 251 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 GNG7O60262 68 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 SNAPC5O75971 98 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 IGKV1-39P01597 117 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 IGKV1D-39P04432 117 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 PRM2P04554 102 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 PSMB9P28065 219 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 SDC2P34741 201 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 HERV-K104P61576 105 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 ERVK-16P61578 105 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 PAFAH1B2P68402 229 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 CATR1Q13166 79 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 POU2AF1Q16633 256 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 LINC00336Q6ZUF6 198 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
PCNX4-208ENST00000554534 TPRA1Q86W33 373 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 TSPAN14Q8NG11 270 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 DGCR14Q96DF8 476 aaKnown RBP4.81□□□□□ -1.64
PCNX4-208ENST00000554534 OR10C1Q96KK4 312 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 ZNF2Q9BSG1 426 aaPredicted RBP4.81□□□□□ -1.64
PCNX4-208ENST00000554534 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 C8orf4Q9NR00 106 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 NDUFB11Q9NX14 153 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 EHFQ9NZC4 300 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
PCNX4-208ENST00000554534 LOC100506127A0A0U1RQW1 187 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 CYB5BO43169 146 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 RBFOX2O43251 390 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCNX4-208ENST00000554534 TMEM50AO95807 157 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 IFNA10P01566 189 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 EIF4EP06730 217 aaKnown RBP4.8□□□□□ -1.64
PCNX4-208ENST00000554534 F2RP25116 425 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 ETV6P41212 452 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 HSPA13P48723 471 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 CMC4P56277 68 aaPredicted RBP4.8□□□□□ -1.64
PCNX4-208ENST00000554534 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
PCNX4-208ENST00000554534 TIGITQ495A1 244 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 PSMG4Q5JS54 123 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 PVRIGQ6DKI7 326 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 SFXN4Q6P4A7 337 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 ZNF367Q7RTV3 350 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 UBE2DNLQ8IWF7 75 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 ZBTB34Q8NCN2 500 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 RAB40CQ96S21 281 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 FXYD6Q9H0Q3 95 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 VSIRQ9H7M9 311 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 ZFAND3Q9H8U3 227 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 TBC1D24Q9ULP9 559 aa4.8□□□□□ -1.64
PCNX4-208ENST00000554534 ZNF705EA8MWA4 302 aaPredicted RBP4.79□□□□□ -1.64
PCNX4-208ENST00000554534 K7EQG2 157 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
PCNX4-208ENST00000554534 PI3P19957 117 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 TCTAP57738 103 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 TNP2Q05952 138 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 DHRS2Q13268 280 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 ARL6IP1Q15041 203 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
PCNX4-208ENST00000554534 GDF5OSQ5U4N7 250 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 CENPSQ8N2Z9 138 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 MAPKAPK5-AS1Q8N8E1 139 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 DUSP18Q8NEJ0 188 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 OR5AP2Q8NGF4 316 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 OR1P1Q8NH06 330 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 OR4A16Q8NH70 328 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 TMEM230Q96A57 120 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 MRGPRFQ96AM1 343 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 TMEM56Q96MV1 263 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
PCNX4-208ENST00000554534 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 RNF126Q9BV68 326 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 IFT46Q9NQC8 304 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 COMMD9Q9P000 198 aa4.79□□□□□ -1.64
PCNX4-208ENST00000554534 IFNA21P01568 189 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 IFNA17P01571 189 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 P0DMU3 169 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 FAM231AP0DMU4 169 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 FAM231CP0DMU5 169 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 MIFP14174 115 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 NPPCP23582 126 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 FUSP35637 526 aaKnown RBP eCLIP4.78□□□□□ -1.64
PCNX4-208ENST00000554534 P2RY1P47900 373 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 TBCEQ15813 527 aaPredicted RBP4.78□□□□□ -1.64
PCNX4-208ENST00000554534 H2BFWTQ7Z2G1 175 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 LYSMD2Q8IV50 215 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 SEC22AQ96IW7 307 aa4.78□□□□□ -1.64
PCNX4-208ENST00000554534 GINS3Q9BRX5 216 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms