RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 UBBP0CG47 229 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 BCL2P10415 239 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 S100A4P26447 101 aaKnown RBP2.73□□□□□ -1.97
SCFD1-211ENST00000554437 ZNF80P51504 273 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-211ENST00000554437 RRN3P1Q2M238 152 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 LYZL2Q7Z4W2 148 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 DERL1Q9BUN8 251 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 MND1Q9BWT6 205 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 TUBA4BQ9H853 241 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 OR5V1Q9UGF6 321 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 TRAPPC2LQ9UL33 140 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 U3KQK5 164 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 BCL9O00512 1426 aa2.73□□□□□ -1.97
SCFD1-211ENST00000554437 ZNF98A6NK75 572 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 MIF4GDA9UHW6 222 aaKnown RBP2.72□□□□□ -1.97
SCFD1-211ENST00000554437 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 LINC00587B1AMM8 73 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 TECPR2O15040 1411 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 C1QCP02747 245 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 IL4P05112 153 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 MPC1LP0DKB6 136 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 CCL3P10147 92 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 NFYBP25208 207 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 CMPK1P30085 196 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 S100A11P31949 105 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 TAS2R30P59541 319 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 PSG9Q00887 426 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 FUT5Q11128 374 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 RTL8BQ17RB0 113 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 HRCT1Q6UXD1 115 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 CANT1Q8WVQ1 401 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 GPX7Q96SL4 187 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-211ENST00000554437 UPK3BQ9BT76 320 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 AICDAQ9GZX7 198 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 CACYBPQ9HB71 228 aaKnown RBP2.72□□□□□ -1.97
SCFD1-211ENST00000554437 XAGE1AQ9HD64 81 aa2.72□□□□□ -1.97
SCFD1-211ENST00000554437 MCTS1Q9ULC4 181 aaKnown RBP2.72□□□□□ -1.97
SCFD1-211ENST00000554437 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 IGKV1OR2-108A0A075B7D4 117 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 A0A1B0GV90 55 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 LOC102725191A0A1B0GVB3 256 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 TRDV1A0A1B0GX56 115 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 GRIFINA4D1Z8 144 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 TLCD2A6NGC4 264 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 GGT3PA6NGU5 568 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 C17orf51A8MQB3 221 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 A8MUU9 505 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 BUB1B-PAK6H3BSN5 160 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 OVOL1O14753 267 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 TAX1BP3O14907 124 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 LEPROTO15243 131 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 IGHV1-69P01742 117 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 C1QAP02745 245 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 TRGC2P03986 189 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 CRHBPP24387 322 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 RBM11P57052 281 aaKnown RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 FXYD7P58549 80 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 MEF2BQ02080 365 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 AKR1C1Q04828 323 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 RPL18Q07020 188 aaKnown RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF816Q0VGE8 651 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 SPANXN3Q5MJ09 141 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF322Q6U7Q0 402 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 LRRC28Q86X40 367 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 OR8I2Q8N0Y5 310 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 CNEP1R1Q8N9A8 125 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 BPIFB6Q8NFQ5 453 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 OR51T1Q8NGJ9 327 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 C1orf54Q8WWF1 131 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 SLAMF6Q96DU3 332 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 BORCS8Q96FH0 119 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 CARD19Q96LW7 228 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 SLC25A21Q9BQT8 299 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 OR2H1Q9GZK4 316 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 SLC39A9Q9NUM3 307 aa2.71□□□□□ -1.98
SCFD1-211ENST00000554437 BAZ1BQ9UIG0 1483 aaKnown RBP2.71□□□□□ -1.98
SCFD1-211ENST00000554437 CCDC171Q6TFL3 1326 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF860A6NHJ4 632 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 FABP5P3A8MUU1 101 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 C9JAW5 83 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 H7BYZ3 331 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 TPST1O60507 370 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 SMIM24O75264 130 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 LY6HO94772 140 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 TNFSF15O95150 251 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 EVX1P49640 407 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 KLF3P57682 345 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-211ENST00000554437 YPEL3P61236 119 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-211ENST00000554437 PLCXD2Q0VAA5 305 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 MORN2Q502X0 79 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 LDLRAD2Q5SZI1 272 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 BCL2L15Q5TBC7 163 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 Q6ZQT7 251 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF767PQ75MW2 155 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 TRAPPC6BQ86SZ2 158 aa2.7□□□□□ -1.98
SCFD1-211ENST00000554437 RPRMLQ8N4K4 120 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms