RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TSPOAP1O95153 1857 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 MEGF6O75095 1541 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 SIGLEC1Q9BZZ2 1709 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 ABCC12Q96J65 1359 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 ZNFX1Q9P2E3 1918 aaKnown RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 C2orf16Q68DN1 1984 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SOGA1O94964 1423 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 UHRF1BP1Q6BDS2 1440 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SETD5Q9C0A6 1442 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SCN2AQ99250 2005 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 IGLV3-12A0A075B6K2 115 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TRAV40A0A0B4J280 105 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 A0A1W2PQD3 144 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 IRGMA1A4Y4 181 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TMEM189A5PLL7 270 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 C17orf98A8MV24 154 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SLC22A1O15245 554 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 GADD45GO95257 159 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 NPYP01303 97 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 IGHV3-7P01780 117 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TRGC2P03986 189 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 GZMBP10144 247 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 FABP2P12104 132 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 DEFA4P12838 97 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 S100A11P31949 105 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SRP9P49458 86 aaKnown RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 INSL3P51460 131 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 RBM11P57052 281 aaKnown RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 YPEL3P61236 119 aaPredicted RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 RPS11P62280 158 aaKnown RBP eCLIP1.34□□□□□ -2.19
SRP54-204ENST00000553923 RHOGP84095 191 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 OR8B8Q15620 311 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 KISS1Q15726 138 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 MSMO1Q15800 293 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 MIAQ16674 131 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 KRTAP25-1Q3LHN0 102 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 KHDC3LQ587J8 217 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 BRMS1LQ5PSV4 323 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 DNLZQ5SXM8 178 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 ZFAND6Q6FIF0 208 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SPINT4Q6UDR6 99 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 DPPA3Q6W0C5 159 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 LYPD6Q86Y78 171 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 HIST3H2BBQ8N257 126 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 C3orf22Q8N5N4 141 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TMEM229BQ8NBD8 167 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TSTD1Q8NFU3 115 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 OR10P1Q8NGE3 313 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 DCANP1Q8TF63 244 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 ADAT3Q96EY9 351 aaPredicted RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 OR8B2Q96RD0 313 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 GPX7Q96SL4 187 aaPredicted RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 YIPF3Q9GZM5 350 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 AICDAQ9GZX7 198 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TMEM126AQ9H061 195 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 DUSP21Q9H596 190 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 C16orf95Q9H693 158 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 TUBA4BQ9H853 241 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 CYTL1Q9NRR1 136 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 SPANXCQ9NY87 97 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 HSPB8Q9UJY1 196 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 ZNF443Q9Y2A4 671 aaPredicted RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 KLK5Q9Y337 293 aaPredicted RBP1.34□□□□□ -2.19
SRP54-204ENST00000553923 TIMM9Q9Y5J7 89 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 NUBP2Q9Y5Y2 271 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 MINOS1-NBL1R4GNA1 71 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 PLA2R1Q13018 1463 aa1.34□□□□□ -2.19
SRP54-204ENST00000553923 GTF3C1Q12789 2109 aa1.34□□□□□ -2.2
SRP54-204ENST00000553923 CPDO75976 1380 aa1.34□□□□□ -2.2
SRP54-204ENST00000553923 FMN1Q68DA7 1419 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CDC42BPBQ9Y5S2 1711 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 TRAV36DV7A0A075B6V5 113 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 IGHV3OR16-8A0A075B7F1 116 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 A0A087X0T9 212 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 A0A0J9YW62 118 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 C11orf86A6NJI1 115 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 COLCA2A8K830 154 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 GGTLC3B5MD39 225 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 GABARAPH6UMI1 98 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 TMEM256-PLSCR3K7ERE1 68 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 SYNGR2O43760 224 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 LYZL6O75951 148 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CST7O76096 145 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 NAPSAO96009 420 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 DBIP07108 87 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 CXCL1P09341 107 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 BCL2P10415 239 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 ZNF22P17026 224 aaPredicted RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 LGALS3P17931 250 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 RPS3P23396 243 aaKnown RBP eCLIP1.33□□□□□ -2.2
SRP54-204ENST00000553923 SDC4P31431 198 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 RPL28P46779 137 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 XCL1P47992 114 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 POLR2HP52434 150 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 UBE2BP63146 152 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 RELAQ04206 551 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 LINC01554Q52M75 96 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 PYDC2Q56P42 97 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 AGTRAPQ6RW13 159 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms