RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DEFB112Q30KQ8 113 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 SPANXN5Q5MJ07 72 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 LDLRAD2Q5SZI1 272 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 ETFRF1Q6IPR1 90 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 CLEC9AQ6UXN8 241 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 KCNRGQ8N5I3 272 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 Q8N6K4 173 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 OR10P1Q8NGE3 313 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 OR1S2Q8NGQ3 325 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF418Q8TF45 676 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-202ENST00000553619 PINX1Q96BK5 328 aaKnown RBP3.98□□□□□ -1.77
VTI1B-202ENST00000553619 RITA1Q96K30 269 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 AQP10Q96PS8 301 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 ARL6Q9H0F7 186 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 MAGT1Q9H0U3 335 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF430Q9H8G1 570 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-202ENST00000553619 NDUFA4L2Q9NRX3 87 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 LYRM2Q9NU23 88 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-202ENST00000553619 THYN1Q9P016 225 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 MOB4Q9Y3A3 225 aa3.98□□□□□ -1.77
VTI1B-202ENST00000553619 TET2Q6N021 2002 aaPredicted RBP3.97□□□□□ -1.77
VTI1B-202ENST00000553619 FLNCQ14315 2725 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 RPS10-NUDT3A0A1W2PQS6 291 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 A6NDX4 124 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 FAM24AA6NFZ4 105 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 MSGN1A6NI15 193 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 H0YIZ8 118 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SMLR1H3BR10 107 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CORTO00230 105 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 JTBO76095 146 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 NXPH3O95157 252 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 LY6G6DO95868 133 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CA2P00918 260 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 IFNA5P01569 189 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 HLA-DRB1P01911 266 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 IFNA4P05014 189 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CRYBA1P05813 215 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 OR13C7P0DN81 318 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 IAPPP10997 89 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 DEFA4P12838 97 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 HIST1H1BP16401 226 aaKnown RBP3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SRD5A1P18405 259 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CD24P25063 80 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CNTFRP26992 372 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SULT1A1P50225 295 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 OR2B8PP59922 312 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 GNB1P62873 340 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 CX3CL1P78423 397 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF266Q14584 549 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 OPCMLQ14982 345 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 LGALSLQ3ZCW2 172 aaPredicted RBP3.97□□□□□ -1.77
VTI1B-202ENST00000553619 C2orf83Q53S99 150 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 Q5BKY6 102 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 EIF5AL1Q6IS14 154 aaKnown RBP3.97□□□□□ -1.77
VTI1B-202ENST00000553619 TMUB2Q71RG4 321 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM252Q8N6L7 170 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 Q8N9W7 124 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 OR11H4Q8NGC9 324 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SCGB1C1Q8TD33 95 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 ABHD5Q8WTS1 349 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SRSF12Q8WXF0 261 aaKnown RBP3.97□□□□□ -1.77
VTI1B-202ENST00000553619 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 PRSS22Q9GZN4 317 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 PLSCR3Q9NRY6 295 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 OR5AC2Q9NZP5 309 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 HSPB11Q9Y547 144 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 RELNP78509 3460 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 TNCP24821 2201 aa3.97□□□□□ -1.77
VTI1B-202ENST00000553619 SMG1Q96Q15 3661 aaKnown RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 TRGV11A0A075B6L2 103 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 FNDC10F2Z333 226 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 FCN1O00602 326 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SOX15O60248 233 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SCGB2A1O75556 95 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SNAPINO95295 136 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 OPN1MWP04001 364 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 OPN1MW2P0DN77 364 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 OPN1MW3P0DN78 364 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 TPT1P13693 172 aaKnown RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 GCSHP23434 173 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 NPY1RP25929 384 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 GPX4P36969 197 aaPredicted RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 VDAC2P45880 294 aaPredicted RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 PAX9P55771 341 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 RPL15P61313 204 aaKnown RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 DLK1P80370 383 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 EWSR1Q01844 656 aaKnown RBP eCLIP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 CD300CQ08708 224 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 RAB31Q13636 194 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 EXOSC2Q13868 293 aaKnown RBP3.96□□□□□ -1.78
VTI1B-202ENST00000553619 LY6EQ16553 131 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 AKIRIN2Q53H80 203 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 C9orf152Q5JTZ5 239 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SLC25A24Q6NUK1 477 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM14EPQ6UXP3 125 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SLC35E3Q7Z769 313 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 TTC9CQ8N5M4 171 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 C5orf56Q8N8D9 126 aa3.96□□□□□ -1.78
VTI1B-202ENST00000553619 SLC24A4Q8NFF2 622 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms