RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 TMEM272A0A1B0GTI8 110 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 J3QRK9 145 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 K7EIM0 57 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 YIF1AO95070 293 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 SPART-AS1P0CW21 52 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 ZNF182P17025 639 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-222ENST00000551425 RAB6AP20340 208 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 WT1-ASQ06250 92 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 Q56UQ5 140 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 THOC7Q6I9Y2 204 aaKnown RBP8.48□□□□□ -1.05
PTCH1-222ENST00000551425 HSD17B13Q7Z5P4 300 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-222ENST00000551425 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 DUSP18Q8NEJ0 188 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 AP3S1Q92572 193 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 RAB3CQ96E17 227 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 VSIRQ9H7M9 311 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 SPATA2Q9UM82 520 aa8.48□□□□□ -1.05
PTCH1-222ENST00000551425 NACAE9PAV3 2078 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 METTL21EPA6NDL7 271 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 UPK2O00526 184 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 MZT2AQ6P582 158 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 LILRB2Q8N423 598 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 DYNC2LI1Q8TCX1 351 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 ST8SIA2Q92186 375 aa8.47□□□□□ -1.05
PTCH1-222ENST00000551425 F11RQ9Y624 299 aaKnown RBP8.47□□□□□ -1.05
PTCH1-222ENST00000551425 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 IGKV1D-13A0A0B4J2D9 117 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 A6NHS1 94 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 KNCNA6PVL3 124 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 MFNGO00587 321 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 ST8SIA3O43173 380 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 EIF4EP06730 217 aaKnown RBP8.46□□□□□ -1.06
PTCH1-222ENST00000551425 TRAPPC2P0DI81 140 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 TRAPPC2BP0DI82 140 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 IGKV1-13P0DP09 117 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 NFYAP23511 347 aaPredicted RBP8.46□□□□□ -1.06
PTCH1-222ENST00000551425 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 LGALS14Q8TCE9 139 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 GRAMD2BQ96HH9 432 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 GINS3Q9BRX5 216 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 NXF2Q9GZY0 626 aaKnown RBP8.46□□□□□ -1.06
PTCH1-222ENST00000551425 TAS2R8Q9NYW2 309 aa8.46□□□□□ -1.06
PTCH1-222ENST00000551425 CCDC59Q9P031 241 aaKnown RBP8.46□□□□□ -1.06
PTCH1-222ENST00000551425 TMEM189A5PLL7 270 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 K7EQG2 157 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 RBFOX2O43251 390 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTCH1-222ENST00000551425 SCGNO76038 276 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 APOHP02749 345 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-222ENST00000551425 CTXN2P0C2S0 81 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 GNB3P16520 340 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 TAS2R31P59538 309 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 RPL11P62913 178 aaKnown RBP8.45□□□□□ -1.06
PTCH1-222ENST00000551425 OR5H6Q8NGV6 325 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 NEU1Q99519 415 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 ATG5Q9H1Y0 275 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 COMMD3Q9UBI1 195 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 RABAC1Q9UI14 185 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 TMED3Q9Y3Q3 217 aa8.45□□□□□ -1.06
PTCH1-222ENST00000551425 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 HIST1H1DP16402 221 aaKnown RBP8.44□□□□□ -1.06
PTCH1-222ENST00000551425 DTYMKP23919 212 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 TALDO1P37837 337 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 UBE2NLQ5JXB2 153 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 SPAG16Q8N0X2 631 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 OR10R2Q8NGX6 335 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 S100A16Q96FQ6 103 aaKnown RBP8.44□□□□□ -1.06
PTCH1-222ENST00000551425 C18orf15Q96N68 181 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 TXN2Q99757 166 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 DIABLOQ9NR28 239 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 RHBDL2Q9NX52 303 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
PTCH1-222ENST00000551425 A0A075B6Q4 140 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 A0A0A6YYH2 397 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 A6NJ64 397 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 NQO2P16083 231 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 MFAP4P55083 255 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 ARL6IP1Q15041 203 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 OXA1LQ15070 435 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 ZNF705AQ6ZN79 300 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-222ENST00000551425 LYPD1Q8N2G4 141 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 SAMD12Q8N8I0 201 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
PTCH1-222ENST00000551425 LSM10Q969L4 123 aaKnown RBP8.43□□□□□ -1.06
PTCH1-222ENST00000551425 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms