RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CBLN1P23435 193 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 SNCAP37840 140 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 HOXA1P49639 335 aaPredicted RBP12.02□□□□□ -0.49
DDX54-204ENST00000546898 Q56UQ5 140 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 SPINK9Q5DT21 86 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 OR52E5Q8NH55 327 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 MISP3Q96FF7 219 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 TXN2Q99757 166 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 ENY2Q9NPA8 101 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
DDX54-204ENST00000546898 STAB2Q8WWQ8 2551 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 CORTO00230 105 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 NDUFA4O00483 81 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 IGHV4-30-4P0DP06 118 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 ANXA3P12429 323 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 EDN2P20800 178 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
DDX54-204ENST00000546898 MFAP4P55083 255 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 SRPXP78539 464 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 TMEM187Q14656 261 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 UBAC2Q8NBM4 344 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 CACNG8Q8WXS5 425 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 SRRQ9GZT4 340 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 MRPL27Q9P0M9 148 aaKnown RBP12.01□□□□□ -0.49
DDX54-204ENST00000546898 CACFD1Q9UGQ2 172 aa12.01□□□□□ -0.49
DDX54-204ENST00000546898 MT-CO2P00403 227 aa12□□□□□ -0.49
DDX54-204ENST00000546898 C8orf88P0DMB2 117 aa12□□□□□ -0.49
DDX54-204ENST00000546898 AKR1C4P17516 323 aa12□□□□□ -0.49
DDX54-204ENST00000546898 ADMP35318 185 aa12□□□□□ -0.49
DDX54-204ENST00000546898 SPCS3P61009 180 aa12□□□□□ -0.49
DDX54-204ENST00000546898 ZNF57Q68EA5 555 aaPredicted RBP12□□□□□ -0.49
DDX54-204ENST00000546898 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
DDX54-204ENST00000546898 Q6ZRM9 215 aa12□□□□□ -0.49
DDX54-204ENST00000546898 UXS1Q8NBZ7 420 aa12□□□□□ -0.49
DDX54-204ENST00000546898 ASCL2Q99929 193 aa12□□□□□ -0.49
DDX54-204ENST00000546898 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
DDX54-204ENST00000546898 CHRDL1Q9BU40 450 aa12□□□□□ -0.49
DDX54-204ENST00000546898 DAZ1Q9NQZ3 744 aaKnown RBP12□□□□□ -0.49
DDX54-204ENST00000546898 C19orf73Q9NVV2 129 aa12□□□□□ -0.49
DDX54-204ENST00000546898 CACNG5Q9UF02 275 aa12□□□□□ -0.49
DDX54-204ENST00000546898 U3KQK5 164 aa12□□□□□ -0.49
DDX54-204ENST00000546898 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
DDX54-204ENST00000546898 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
DDX54-204ENST00000546898 NUPL2O15504 423 aaKnown RBP11.99□□□□□ -0.49
DDX54-204ENST00000546898 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
DDX54-204ENST00000546898 SUPT4H1P63272 117 aaKnown RBP11.99□□□□□ -0.49
DDX54-204ENST00000546898 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
DDX54-204ENST00000546898 TM4SF20Q53R12 229 aa11.99□□□□□ -0.49
DDX54-204ENST00000546898 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
DDX54-204ENST00000546898 GPR146Q96CH1 333 aa11.99□□□□□ -0.49
DDX54-204ENST00000546898 MLXQ9UH92 298 aa11.99□□□□□ -0.49
DDX54-204ENST00000546898 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 CTSGP08311 255 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 SULT1A3P0DMM9 295 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 SULT1A4P0DMN0 295 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 CD81P60033 236 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 BSXQ3C1V8 233 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 TMEM128Q5BJH2 165 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 BTNL8Q6UX41 500 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 TMEM61Q8N0U2 210 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 LGI3Q8N145 548 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
DDX54-204ENST00000546898 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 K7EMT4 169 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 GNG7O60262 68 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 NPBWR1P48145 328 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 INPP1P49441 399 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 TRIQKQ629K1 86 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 TMED4Q7Z7H5 227 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 WDR89Q96FK6 387 aaPredicted RBP11.97□□□□□ -0.49
DDX54-204ENST00000546898 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 NEURL2Q9BR09 285 aa11.97□□□□□ -0.49
DDX54-204ENST00000546898 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 HTR2BP41595 481 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 CCR6P51684 374 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 RBMS2Q15434 407 aaKnown RBP11.96□□□□□ -0.49
DDX54-204ENST00000546898 NMSQ5H8A3 153 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 ZMAT4Q9H898 229 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 HEYLQ9NQ87 328 aaPredicted RBP11.96□□□□□ -0.49
DDX54-204ENST00000546898 PRR13Q9NZ81 148 aa11.96□□□□□ -0.49
DDX54-204ENST00000546898 TENM3Q9P273 2699 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 SCGB2A1O75556 95 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 RBPMS2Q6ZRY4 209 aaKnown RBP11.95□□□□□ -0.5
DDX54-204ENST00000546898 LYZL2Q7Z4W2 148 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 OR10C1Q96KK4 312 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 TM2D3Q9BRN9 247 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 C20orf24Q9BUV8 137 aa11.95□□□□□ -0.5
DDX54-204ENST00000546898 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms