RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PPP5D1E7EU14 171 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 IGKV1-39P01597 117 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 IGLV1-51P01701 117 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 IGHV3-23P01764 117 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 IGKV1D-39P04432 117 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 CLEC3BP05452 202 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 GP9P14770 177 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SPNP16150 400 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 UCP1P25874 307 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 HSPE1P61604 102 aaKnown RBP5.62□□□□□ -1.51
CPSF7-224ENST00000544990 ERHP84090 104 aaKnown RBP5.62□□□□□ -1.51
CPSF7-224ENST00000544990 PRCDQ00LT1 54 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 DHODHQ02127 395 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 WT1-ASQ06250 92 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SP6Q3SY56 376 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SPANXN2Q5MJ10 180 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 GPHB5Q86YW7 130 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SGPP2Q8IWX5 399 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 Q8N402 240 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 TOMM5Q8N4H5 51 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 VN1R17PQ8TDU5 208 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 DEDD2Q8WXF8 326 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 RTBDNQ9BSG5 229 aaPredicted RBP5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SLC2A8Q9NY64 477 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SIGLEC8Q9NYZ4 499 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 LSM4Q9Y4Z0 139 aaKnown RBP5.62□□□□□ -1.51
CPSF7-224ENST00000544990 F11RQ9Y624 299 aaKnown RBP5.62□□□□□ -1.51
CPSF7-224ENST00000544990 SMAD5-AS1Q9Y6J3 95 aa5.62□□□□□ -1.51
CPSF7-224ENST00000544990 PIGBOS1A0A0B4J2F0 54 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 MFSD2BA6NFX1 497 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 LGALS9O00182 355 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 SCAF4O95104 1147 aaKnown RBP5.61□□□□□ -1.51
CPSF7-224ENST00000544990 OR2C1O95371 312 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 CDS2O95674 445 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 IFNA17P01571 189 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 IGKV1-5P01602 117 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 CSN3P07498 182 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 OR5AC1P0C628 307 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 ETV6P41212 452 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 LCN12Q6JVE5 192 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 PLET1Q6UQ28 207 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 CCDC190Q86UF4 302 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 FAM219AQ8IW50 185 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 SLC35G3Q8N808 338 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 OR2K2Q8NGT1 345 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 OR1P1Q8NH06 330 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 GLYATL2Q8WU03 294 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 RBPMSQ93062 196 aaKnown RBP5.61□□□□□ -1.51
CPSF7-224ENST00000544990 ATP6V0BQ99437 205 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 B9D2Q9BPU9 175 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 TMEM222Q9H0R3 208 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 C5orf66Q9H5L9 145 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 NAA60Q9H7X0 242 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 PLEKHA3Q9HB20 300 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 PALMDQ9NP74 551 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 ENY2Q9NPA8 101 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 GAR1Q9NY12 217 aaKnown RBP5.61□□□□□ -1.51
CPSF7-224ENST00000544990 S4R3C0 116 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 V9GYH0 126 aa5.61□□□□□ -1.51
CPSF7-224ENST00000544990 ZNF320A2RRD8 509 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 CRYM-AS1A6NIL9 109 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 HLA-AP01891 365 aaKnown RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 NHLRC4P0CG21 123 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 ANXA3P12429 323 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 AKR1C4P17516 323 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 GPR183P32249 361 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 SNCAP37840 140 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 INPP1P49441 399 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 SUB1P53999 127 aaKnown RBP eCLIP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 ZNF79Q15937 498 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 IZUMO4Q1ZYL8 232 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 ZNF57Q68EA5 555 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 SPSB3Q6PJ21 355 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 IL34Q6ZMJ4 242 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 Q6ZRM9 215 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 Q6ZSN1 163 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 ZNF114Q8NC26 417 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 DYNLRB2Q8TF09 96 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 SCARB1Q8WTV0 552 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 TRIM63Q969Q1 353 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 GALNT14Q96FL9 552 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 BSCL2Q96G97 398 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 WDR12Q9GZL7 423 aaKnown RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 C21orf62Q9NYP8 219 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 TECRQ9NZ01 308 aaKnown RBP5.6□□□□□ -1.51
CPSF7-224ENST00000544990 CACFD1Q9UGQ2 172 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
CPSF7-224ENST00000544990 A0A0B4J293 547 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 C2orf70A6NJV1 201 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 INS-IGF2F8WCM5 200 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 CORTO00230 105 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 ST8SIA3O43173 380 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 TGOLN2O43493 480 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 P0C879 139 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 FOLR2P14207 255 aa5.59□□□□□ -1.51
CPSF7-224ENST00000544990 HOXA1P49639 335 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-224ENST00000544990 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms