RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 RAB32Q13637 225 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 TMEM65Q6PI78 240 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 FAM223AQ8IWN6 122 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 NECAP1Q8NC96 275 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 CHAC2Q8WUX2 184 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 MS4A10Q96PG2 267 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 ZNF436Q9C0F3 470 aaPredicted RBP10.17□□□□□ -0.78
DDX11-227ENST00000544652 ZNF355PQ9NSJ1 428 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 PFDN2Q9UHV9 154 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 CORTO00230 105 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 SSSCA1O60232 199 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 TMEM50AO95807 157 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 GIPP09681 153 aaPredicted RBP10.16□□□□□ -0.78
DDX11-227ENST00000544652 IAPPP10997 89 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 NPY1RP25929 384 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 CDX1P47902 265 aaPredicted RBP10.16□□□□□ -0.78
DDX11-227ENST00000544652 TPPP2P59282 170 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 SLC25A24Q6NUK1 477 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 LCNL1Q6ZST4 164 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 PPP1R1CQ8WVI7 109 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 CITED2Q99967 270 aaPredicted RBP10.16□□□□□ -0.78
DDX11-227ENST00000544652 THYN1Q9P016 225 aa10.16□□□□□ -0.78
DDX11-227ENST00000544652 LSM5Q9Y4Y9 91 aaKnown RBP10.16□□□□□ -0.78
DDX11-227ENST00000544652 TSSC4Q9Y5U2 329 aaPredicted RBP10.16□□□□□ -0.78
DDX11-227ENST00000544652 A0A0G2JLM5 398 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 C15orf62A8K5M9 175 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 TSC22D2O75157 780 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 DEDDO75618 318 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 OR2J3O76001 311 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 NDUFB8O95169 186 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 RPL23AP62750 156 aaKnown RBP10.15□□□□□ -0.78
DDX11-227ENST00000544652 RHOGP84095 191 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 NOXA1Q86UR1 476 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
DDX11-227ENST00000544652 TCRBV4S1A1TA0A5B7 111 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 PMS2P5A8MQ11 134 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 H0YIZ8 118 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 I3L2K1 104 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 K7EIM0 57 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 MPC2O95563 127 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 IFNA10P01566 189 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 LYL1P12980 280 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 S100A10P60903 97 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 RAP2BP61225 183 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
DDX11-227ENST00000544652 DEFA5Q01523 94 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 C15orf32Q32M92 178 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 C3orf56Q8N813 242 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 RNASEH2CQ8TDP1 164 aaKnown RBP10.14□□□□□ -0.79
DDX11-227ENST00000544652 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 OR4C12Q96R67 309 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 PSENENQ9NZ42 101 aa10.14□□□□□ -0.79
DDX11-227ENST00000544652 PRSS46E5RG02 174 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 I3L521 148 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 PVALBP20472 110 aaPredicted RBP10.13□□□□□ -0.79
DDX11-227ENST00000544652 RUNX1Q01196 453 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 ATP5G2Q06055 141 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
DDX11-227ENST00000544652 LRRC37A5PQ49AS3 106 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 SPANXN5Q5MJ07 72 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 HIST2H2BDQ6DRA6 164 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 ZNF343Q6P1L6 599 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 PRSS54Q6PEW0 395 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 SCARB1Q8WTV0 552 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 CXorf58Q96LI9 332 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
DDX11-227ENST00000544652 STRAPQ9Y3F4 350 aaKnown RBP10.13□□□□□ -0.79
DDX11-227ENST00000544652 TRAV14DV4A0A0A6YYC5 116 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 A0A1B0GVG6 124 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 MFSD2BA6NFX1 497 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 E5RGE8 158 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 H3BP45 60 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 L7N2F9 121 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 MT-CO2P00403 227 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 RLN2P04090 185 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 LGALS1P09382 135 aaKnown RBP10.12□□□□□ -0.79
DDX11-227ENST00000544652 PET100P0DJ07 73 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 FCGR2BP31994 310 aaPredicted RBP10.12□□□□□ -0.79
DDX11-227ENST00000544652 RAB11AP62491 216 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 VAMP2P63027 116 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 FAM209BQ5JX69 171 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 C18orf65Q6ZTR6 163 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 C4orf3Q8WVX3 66 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 MISP3Q96FF7 219 aa10.12□□□□□ -0.79
DDX11-227ENST00000544652 FNDC4Q9H6D8 234 aaPredicted RBP10.12□□□□□ -0.79
DDX11-227ENST00000544652 LYRM2Q9NU23 88 aaPredicted RBP10.12□□□□□ -0.79
DDX11-227ENST00000544652 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.11□□□□□ -0.79
DDX11-227ENST00000544652 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms