RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 NAT1P18440 290 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 PHLDA2Q53GA4 152 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 ZNF114Q8NC26 417 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 ST8SIA2Q92186 375 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 PINX1Q96BK5 328 aaKnown RBP16.51■□□□□ 0.23
CDKN3-207ENST00000543789 FXYD6Q9H0Q3 95 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 MS4A6AQ9H2W1 248 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 VSIRQ9H7M9 311 aa16.51■□□□□ 0.23
CDKN3-207ENST00000543789 FAM212BQ9NTI7 297 aaPredicted RBP16.51■□□□□ 0.23
CDKN3-207ENST00000543789 IGLL5B9A064 214 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 S100GP29377 79 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 DEFB131AP59861 70 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 ERHP84090 104 aaKnown RBP16.5■□□□□ 0.23
CDKN3-207ENST00000543789 LEMD1Q68G75 181 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 H2BFWTQ7Z2G1 175 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 LILRB2Q8N423 598 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 DUSP18Q8NEJ0 188 aa16.5■□□□□ 0.23
CDKN3-207ENST00000543789 APOHP02749 345 aaPredicted RBP16.49■□□□□ 0.23
CDKN3-207ENST00000543789 HSPE1P61604 102 aaKnown RBP16.49■□□□□ 0.23
CDKN3-207ENST00000543789 RPL11P62913 178 aaKnown RBP16.49■□□□□ 0.23
CDKN3-207ENST00000543789 PRCDQ00LT1 54 aa16.49■□□□□ 0.23
CDKN3-207ENST00000543789 TMEM69Q5SWH9 247 aa16.49■□□□□ 0.23
CDKN3-207ENST00000543789 LPCAT3Q6P1A2 487 aa16.49■□□□□ 0.23
CDKN3-207ENST00000543789 SEC22AQ96IW7 307 aa16.49■□□□□ 0.23
CDKN3-207ENST00000543789 APLNQ9ULZ1 77 aa16.49■□□□□ 0.23
CDKN3-207ENST00000543789 TRAV2A0A0B4J234 112 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 C11orf94C9JXX5 98 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 UBE2NLQ5JXB2 153 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 LYSMD2Q8IV50 215 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 STHQ8IWL8 128 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 HRH4Q9H3N8 390 aa16.48■□□□□ 0.23
CDKN3-207ENST00000543789 IGHV3-66A0A0C4DH42 116 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 HLA-DMAP28067 261 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 PRSS3P35030 304 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 HRH1P35367 487 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 NPBWR1P48145 328 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 TAS2R20P59543 309 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 TBC1D26Q86UD7 250 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 Q9H521 79 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 PUS1Q9Y606 427 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDKN3-207ENST00000543789 HECTD4Q9Y4D8 3996 aa16.47■□□□□ 0.23
CDKN3-207ENST00000543789 IGKV1-39P01597 117 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 IGKV1D-39P04432 117 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 TSPAN5P62079 268 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 ZNF600Q6ZNG1 722 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 FAM24BQ8N5W8 94 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 Q8NAQ8 132 aa16.46■□□□□ 0.23
CDKN3-207ENST00000543789 SAMD12Q8N8I0 201 aa16.45■□□□□ 0.22
CDKN3-207ENST00000543789 TMEM231Q9H6L2 316 aa16.45■□□□□ 0.22
CDKN3-207ENST00000543789 RABAC1Q9UI14 185 aa16.45■□□□□ 0.22
CDKN3-207ENST00000543789 NEDD8Q15843 81 aa16.44■□□□□ 0.22
CDKN3-207ENST00000543789 MRGPRFQ96AM1 343 aa16.44■□□□□ 0.22
CDKN3-207ENST00000543789 ZFAND3Q9H8U3 227 aa16.44■□□□□ 0.22
CDKN3-207ENST00000543789 TMEM50AO95807 157 aa16.43■□□□□ 0.22
CDKN3-207ENST00000543789 GIG44P09565 113 aaPredicted RBP16.43■□□□□ 0.22
CDKN3-207ENST00000543789 RBMY1A1P0DJD3 496 aaKnown RBP16.43■□□□□ 0.22
CDKN3-207ENST00000543789 RBMY1CP0DJD4 496 aa16.43■□□□□ 0.22
CDKN3-207ENST00000543789 NPPCP23582 126 aa16.43■□□□□ 0.22
CDKN3-207ENST00000543789 RBMY1FQ15415 496 aaKnown RBP16.43■□□□□ 0.22
CDKN3-207ENST00000543789 TMEM41BQ5BJD5 291 aa16.43■□□□□ 0.22
CDKN3-207ENST00000543789 IGHV4-28A0A0C4DH34 117 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 A0A1B0GU03 582 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 A0A1W2PS18 150 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 MIFP14174 115 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 HLA-DMBP28068 263 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 SNCAP37840 140 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 RPS19P39019 145 aaKnown RBP16.42■□□□□ 0.22
CDKN3-207ENST00000543789 UCP3P55916 312 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 SPINK9Q5DT21 86 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 CENPSQ8N2Z9 138 aa16.42■□□□□ 0.22
CDKN3-207ENST00000543789 TGFBR1P36897 503 aa16.41■□□□□ 0.22
CDKN3-207ENST00000543789 MORN3Q6PF18 240 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-207ENST00000543789 TRPT1Q86TN4 253 aaKnown RBP16.41■□□□□ 0.22
CDKN3-207ENST00000543789 GPX8Q8TED1 209 aa16.41■□□□□ 0.22
CDKN3-207ENST00000543789 SPP1P10451 314 aa16.4■□□□□ 0.22
CDKN3-207ENST00000543789 IZUMO4Q1ZYL8 232 aa16.4■□□□□ 0.22
CDKN3-207ENST00000543789 GRAMD2BQ96HH9 432 aa16.4■□□□□ 0.22
CDKN3-207ENST00000543789 METTL26Q96S19 204 aa16.4■□□□□ 0.22
CDKN3-207ENST00000543789 DNAH6Q9C0G6 4158 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 TRAV10A0A0B4J240 114 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 ZNF705EA8MWA4 302 aaPredicted RBP16.39■□□□□ 0.21
CDKN3-207ENST00000543789 INS-IGF2F8WCM5 200 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 K7EQG2 157 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 SUB1P53999 127 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDKN3-207ENST00000543789 PVRIGQ6DKI7 326 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 Q6ZTC4 211 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 LINC00336Q6ZUF6 198 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 SLC35G3Q8N808 338 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 STXBP6Q8NFX7 210 aa16.39■□□□□ 0.21
CDKN3-207ENST00000543789 A0A0B4J293 547 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 KNCNA6PVL3 124 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 CORTO00230 105 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 IFNA17P01571 189 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 CRYBB3P26998 211 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 SCPEP1Q9HB40 452 aa16.38■□□□□ 0.21
CDKN3-207ENST00000543789 IGHV4-4A0A075B6R2 117 aa16.37■□□□□ 0.21
CDKN3-207ENST00000543789 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
CDKN3-207ENST00000543789 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms