RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
PPP1CA-210ENST00000542876 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
PPP1CA-210ENST00000542876 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
PPP1CA-210ENST00000542876 SMIM31A0A1B0GVY4 71 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 DNASE2O00115 360 aaPredicted RBP12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 SMIM18P0DKX4 95 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 TGFBR1P36897 503 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 NPBWR1P48145 328 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 HSPE1P61604 102 aaKnown RBP12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 RBMS2Q15434 407 aaKnown RBP12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
PPP1CA-210ENST00000542876 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 CA1P00915 261 aaPredicted RBP12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 NANOS2P60321 138 aaKnown RBP12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 LSM3P62310 102 aaKnown RBP12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 C11orf68Q9H3H3 251 aaKnown RBP12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
PPP1CA-210ENST00000542876 DEDDO75618 318 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 SNCAP37840 140 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 TMEM187Q14656 261 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 TOMM20LQ6UXN7 152 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 SCPEP1Q9HB40 452 aa12.78□□□□□ -0.36
PPP1CA-210ENST00000542876 DFFBO76075 338 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 RCVRNP35243 200 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 UCP3P55916 312 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 SNX29P2Q8IUI4 249 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 ST8SIA2Q92186 375 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
PPP1CA-210ENST00000542876 ATG12O94817 140 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 SUB1P53999 127 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 DEFB131AP59861 70 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 ZNF600Q6ZNG1 722 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 C2CD4CQ8TF44 421 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 PDCD10Q9BUL8 212 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 MS4A6AQ9H2W1 248 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 PUS1Q9Y606 427 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 FRAS1Q86XX4 4008 aa12.76□□□□□ -0.37
PPP1CA-210ENST00000542876 KMT2AQ03164 3969 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 A0A087WXM4 84 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 TRAV2A0A0B4J234 112 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 IGHV3-66A0A0C4DH42 116 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 A0A1W2PS18 150 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 SCGB2A1O75556 95 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 IFNA17P01571 189 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 APOA1P02647 267 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 PGAM2P15259 253 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 AKR1C2P52895 323 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 TCTAP57738 103 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 LEMD1Q68G75 181 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 STHQ8IWL8 128 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 RABAC1Q9UI14 185 aa12.75□□□□□ -0.37
PPP1CA-210ENST00000542876 CORTO00230 105 aa12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 DEFB4AO15263 64 aa12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 NPPCP23582 126 aa12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 YIPF6Q96EC8 236 aa12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 ZNF486Q96H40 463 aaPredicted RBP12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 ENY2Q9NPA8 101 aa12.74□□□□□ -0.37
PPP1CA-210ENST00000542876 TMEM50AO95807 157 aa12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 IZUMO4Q1ZYL8 232 aa12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 CENPSQ8N2Z9 138 aa12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 NARS2Q96I59 477 aaKnown RBP12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 METTL26Q96S19 204 aa12.73□□□□□ -0.37
PPP1CA-210ENST00000542876 M0QYG6 137 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 PIGPP57054 158 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 RND3P61587 244 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 TMEM41BQ5BJD5 291 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
PPP1CA-210ENST00000542876 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 IGKV1-5P01602 117 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 OPRK1P41145 380 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 TRIM16LQ309B1 348 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 RNASE10Q5GAN6 216 aaKnown RBP12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 RNASE11Q8TAA1 199 aaKnown RBP12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 TMEM230Q96A57 120 aa12.71□□□□□ -0.37
PPP1CA-210ENST00000542876 A0A0B4J293 547 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 C3orf85A0A1B0GTC6 90 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 A0A1B0GU03 582 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 FAM25AB3EWG3 89 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 FAM25CB3EWG5 89 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 FAM25GB3EWG6 89 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 IGLL5B9A064 214 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 CLN5O75503 358 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms