RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PPYP01298 95 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 NPY1RP25929 384 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 EMP1P54849 157 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 CATR1Q13166 79 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 TMEM41BQ5BJD5 291 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 AADACL3Q5VUY0 350 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 C10orf67Q8IYJ2 551 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 PLEKHA2Q9HB19 425 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 XCL2Q9UBD3 114 aa8.4□□□□□ -1.06
COPA-205ENST00000541366 MYCBP2O75592 4640 aa8.4□□□□□ -1.07
COPA-205ENST00000541366 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 A0A1B0GU03 582 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 GNG7O60262 68 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 KRASP01116 189 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 CD5P06127 495 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 FGF2P09038 288 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 GNG2P59768 71 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 TRAM1Q15629 374 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 TMEM17Q86X19 198 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 ZBTB34Q8NCN2 500 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 OR1P1Q8NH06 330 aa8.39□□□□□ -1.07
COPA-205ENST00000541366 PINX1Q96BK5 328 aaKnown RBP8.39□□□□□ -1.07
COPA-205ENST00000541366 PUS1Q9Y606 427 aaKnown RBP eCLIP8.39□□□□□ -1.07
COPA-205ENST00000541366 PDCD5O14737 125 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 HTN3P15516 51 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 PSMA1P25786 263 aaKnown RBP8.38□□□□□ -1.07
COPA-205ENST00000541366 G6PCP35575 357 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 RANBP1P43487 201 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 LPAR6P43657 344 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 PPP5CP53041 499 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 ARPC4P59998 168 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 ERVK-16P61578 105 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 RCN1Q15293 331 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 MSMO1Q15800 293 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 RNF212Q495C1 297 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 PACRGLQ8N7B6 248 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 BEST4Q8NFU0 473 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 DCANP1Q8TF63 244 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 TXN2Q99757 166 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 COMMD9Q9P000 198 aa8.38□□□□□ -1.07
COPA-205ENST00000541366 TRAV1-2A0A0B4J238 106 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 RLN1P04808 185 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 RAB3BP20337 219 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 MLLT11Q13015 90 aaPredicted RBP8.37□□□□□ -1.07
COPA-205ENST00000541366 ARL6IP1Q15041 203 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 FCAMRQ8WWV6 532 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 MOB3AQ96BX8 217 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 GRAMD2BQ96HH9 432 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 RAB40CQ96S21 281 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 ACOT13Q9NPJ3 140 aa8.37□□□□□ -1.07
COPA-205ENST00000541366 SNAPC5O75971 98 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 GNRHRP30968 328 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 PSMG4Q5JS54 123 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 ZNF367Q7RTV3 350 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 TMEM56Q96MV1 263 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 MGLLQ99685 303 aa8.36□□□□□ -1.07
COPA-205ENST00000541366 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
COPA-205ENST00000541366 F2RP25116 425 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 P2RY1P47900 373 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 FXYD7P58549 80 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 DHRS2Q13268 280 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 TMEM88Q6PEY1 159 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 SPATA12Q7Z6I5 190 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 YTHDF1Q9BYJ9 559 aaKnown RBP8.35□□□□□ -1.07
COPA-205ENST00000541366 SCN3BQ9NY72 215 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
COPA-205ENST00000541366 PGLYRP1O75594 196 aaPredicted RBP8.34□□□□□ -1.07
COPA-205ENST00000541366 TMEM50AO95807 157 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 NPPCP23582 126 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 MYL9P24844 172 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 DEFB1P60022 68 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 C22orf42Q6IC83 251 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 ZNF705AQ6ZN79 300 aaPredicted RBP8.34□□□□□ -1.07
COPA-205ENST00000541366 TPRA1Q86W33 373 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 HOGA1Q86XE5 327 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 C6orf223Q8N319 242 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 FAM210BQ96KR6 192 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 CCDC90BQ9GZT6 254 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 DUSP21Q9H596 190 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 TMEM231Q9H6L2 316 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 C8orf4Q9NR00 106 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 MRPL36Q9P0J6 103 aaKnown RBP8.34□□□□□ -1.07
COPA-205ENST00000541366 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
COPA-205ENST00000541366 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
COPA-205ENST00000541366 TRAV18A0A075B6X5 111 aa8.33□□□□□ -1.08
COPA-205ENST00000541366 NBDYA0A0U1RRE5 68 aa8.33□□□□□ -1.08
COPA-205ENST00000541366 MEIS3P1A6NDR6 274 aa8.33□□□□□ -1.08
COPA-205ENST00000541366 HELTA6NFD8 242 aa8.33□□□□□ -1.08
COPA-205ENST00000541366 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
COPA-205ENST00000541366 RGS10O43665 173 aa8.33□□□□□ -1.08
COPA-205ENST00000541366 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
COPA-205ENST00000541366 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
COPA-205ENST00000541366 CRYBB3P26998 211 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms