RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 PSMG3Q9BT73 122 aaPredicted RBP14.01□□□□□ -0.17
CLIP1-215ENST00000541108 WNT10AQ9GZT5 417 aa14.01□□□□□ -0.17
CLIP1-215ENST00000541108 WDR83OSQ9Y284 106 aa14.01□□□□□ -0.17
CLIP1-215ENST00000541108 SRP14P37108 136 aaKnown RBP14□□□□□ -0.17
CLIP1-215ENST00000541108 ARSJQ5FYB0 599 aaPredicted RBP14□□□□□ -0.17
CLIP1-215ENST00000541108 ASPHD1Q5U4P2 390 aa14□□□□□ -0.17
CLIP1-215ENST00000541108 TREML4Q6UXN2 200 aa14□□□□□ -0.17
CLIP1-215ENST00000541108 CENPVQ7Z7K6 275 aaPredicted RBP14□□□□□ -0.17
CLIP1-215ENST00000541108 LFNGQ8NES3 379 aa14□□□□□ -0.17
CLIP1-215ENST00000541108 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
CLIP1-215ENST00000541108 DEFA4P12838 97 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 SERF2P84101 59 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 AKIRIN2Q53H80 203 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 CLLU1Q5K131 121 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 FBXO7Q9Y3I1 522 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 TIMM9Q9Y5J7 89 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 TLN2Q9Y4G6 2542 aa13.99□□□□□ -0.17
CLIP1-215ENST00000541108 CYB5BO43169 146 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 IGHG2P01859 326 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 FAM157CP0CG43 387 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 OPRK1P41145 380 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 SULT1A2P50226 295 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 RAB5CP51148 216 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 CRIP2P52943 208 aaPredicted RBP13.98□□□□□ -0.17
CLIP1-215ENST00000541108 MFAP2P55001 183 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 SCGB2A2Q13296 93 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 TMEM144Q7Z5S9 345 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 OR2G3Q8NGZ4 309 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 SH3BGRL3Q9H299 93 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 LSM4Q9Y4Z0 139 aaKnown RBP13.98□□□□□ -0.17
CLIP1-215ENST00000541108 ACANP16112 2415 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 RPS10-NUDT3A0A1W2PQS6 291 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 SMCO3A2RU48 225 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 UMAD1C9J7I0 102 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 ATP6V0E1O15342 81 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 SOX15O60248 233 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 FOSL1P15407 271 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 FGF7P21781 194 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 RUNX1Q01196 453 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 GAMTQ14353 236 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 FAM74A1Q5RGS3 127 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 TEPPQ6URK8 271 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 BTNL8Q6UX41 500 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 TMEM86BQ8N661 226 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 PARP11Q9NR21 331 aa13.98□□□□□ -0.17
CLIP1-215ENST00000541108 ZFHX3Q15911 3703 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 C17orf112F2Z3M2 114 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 IGF1P05019 195 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 SLC16A13Q7RTY0 426 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 SLC35E1Q96K37 410 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 TMUB1Q9BVT8 246 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 NPCDR1Q9BY65 106 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 FNDC4Q9H6D8 234 aaPredicted RBP13.97□□□□□ -0.17
CLIP1-215ENST00000541108 DMRT1Q9Y5R6 373 aa13.97□□□□□ -0.17
CLIP1-215ENST00000541108 HOXA3O43365 443 aaPredicted RBP13.96□□□□□ -0.17
CLIP1-215ENST00000541108 NMBP08949 121 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 AKR1C1Q04828 323 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 RAB31Q13636 194 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 MLANAQ16655 118 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 KLK9Q2XQG4 91 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 UNQ5815/PRO19632Q6UWF5 114 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 ZNF709Q8N972 641 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 FAM110DQ8TAY7 271 aaPredicted RBP13.96□□□□□ -0.17
CLIP1-215ENST00000541108 MISP3Q96FF7 219 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 RSG1Q9BU20 258 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 THYN1Q9P016 225 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 KLK9Q9UKQ9 250 aa13.96□□□□□ -0.17
CLIP1-215ENST00000541108 OTOGQ6ZRI0 2925 aa13.96□□□□□ -0.18
CLIP1-215ENST00000541108 MXRA5Q9NR99 2828 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 SH2D7A6NKC9 451 aaPredicted RBP13.95□□□□□ -0.18
CLIP1-215ENST00000541108 LINC01548A6NM66 108 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 TRIM77I1YAP6 450 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 BLCAPP62952 87 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 NDUFA5Q16718 116 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 SLC35E3Q7Z769 313 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 SAT2Q96F10 170 aaPredicted RBP13.95□□□□□ -0.18
CLIP1-215ENST00000541108 PLA2G2EQ9NZK7 142 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 ZNF580Q9UK33 172 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 IGLV11-55A0A075B6I3 123 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 HIST1H1BP16401 226 aaKnown RBP13.95□□□□□ -0.18
CLIP1-215ENST00000541108 RBMS3Q6XE24 437 aaKnown RBP13.95□□□□□ -0.18
CLIP1-215ENST00000541108 SIGLECL1Q8N7X8 197 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 TMEM116Q8NCL8 245 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
CLIP1-215ENST00000541108 I3L2K1 104 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 MT-CO2P00403 227 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 C9orf152Q5JTZ5 239 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 C19orf35Q6ZS72 473 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 OR2T6Q8NHC8 308 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 KCNIP2Q9NS61 270 aa13.94□□□□□ -0.18
CLIP1-215ENST00000541108 TRAV41A0A0B4J266 112 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 LY6G6DO95868 133 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 CD99P14209 185 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 CAMLGP49069 296 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 C19orf54Q5BKX5 351 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 AKR1C8PQ5T2L2 129 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 DPPA3Q6W0C5 159 aa13.93□□□□□ -0.18
CLIP1-215ENST00000541108 TMEM182Q6ZP80 229 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms