RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 TMEM267Q0VDI3 215 aaPredicted RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 FOXE3Q13461 319 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 AWAT1Q58HT5 328 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 UNQ5815/PRO19632Q6UWF5 114 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 MRPL41Q8IXM3 137 aaKnown RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 COMMD1Q8N668 190 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 OR1L6Q8NGR2 347 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 RNASEH2CQ8TDP1 164 aaKnown RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 AQP10Q96PS8 301 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 ATP6V0BQ99437 205 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 FNDC4Q9H6D8 234 aaPredicted RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 LINC00527Q9UJ94 153 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 TNFSF18Q9UNG2 199 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 LSM5Q9Y4Y9 91 aaKnown RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 HMSDA8MTL9 139 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 WRBO00258 174 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 CCNKO75909 580 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 SCGB1D2O95969 90 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 REG1AP05451 166 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 ELANEP08246 267 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 APELAP0DMC3 54 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 S100A10P60903 97 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 ARL16Q0P5N6 197 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 LRRC37A5PQ49AS3 106 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 C9orf152Q5JTZ5 239 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 SHISA2Q6UWI4 295 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 WFDC12Q8WWY7 111 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 GON7Q9BXV9 100 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 SLA2Q9H6Q3 261 aa8.2□□□□□ -1.1
VPS33A-204ENST00000540669 HEYLQ9NQ87 328 aaPredicted RBP8.2□□□□□ -1.1
VPS33A-204ENST00000540669 PSMB11A5LHX3 300 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 FAM223BA6NKX1 122 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 ADARB2-AS1A8MUL3 147 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 H3BP45 60 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 SMLR1H3BR10 107 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 CORTO00230 105 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 SCAF4O95104 1147 aaKnown RBP8.19□□□□□ -1.1
VPS33A-204ENST00000540669 HIST1H1BP16401 226 aaKnown RBP8.19□□□□□ -1.1
VPS33A-204ENST00000540669 ERHP84090 104 aaKnown RBP8.19□□□□□ -1.1
VPS33A-204ENST00000540669 BAXQ07812 192 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF345Q14585 488 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 FAM223AQ8IWN6 122 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 NECAP1Q8NC96 275 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 ABHD5Q8WTS1 349 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 KLK15Q9H2R5 256 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 HIPK2Q9H2X6 1198 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
VPS33A-204ENST00000540669 STRAPQ9Y3F4 350 aaKnown RBP8.19□□□□□ -1.1
VPS33A-204ENST00000540669 RNF114Q9Y508 228 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 TRRAPQ9Y4A5 3859 aa8.19□□□□□ -1.1
VPS33A-204ENST00000540669 FAM24AA6NFZ4 105 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 PRH1P02810 166 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
VPS33A-204ENST00000540669 SULT1A1P50225 295 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 RPL23AP62750 156 aaKnown RBP8.18□□□□□ -1.1
VPS33A-204ENST00000540669 RUNX1Q01196 453 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
VPS33A-204ENST00000540669 CD69Q07108 199 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 EXOSC2Q13868 293 aaKnown RBP8.18□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 NOXA1Q86UR1 476 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 OR5T1Q8NG75 326 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 VN1R17PQ8TDU5 208 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 CCDC140Q96MF4 163 aa8.18□□□□□ -1.1
VPS33A-204ENST00000540669 MFSD2BA6NFX1 497 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 NDUFB8O95169 186 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 SNCAP37840 140 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 RAB9AP51151 201 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 SLC35B1P78383 322 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 DLK1P80370 383 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 RHOGP84095 191 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 SPANXN5Q5MJ07 72 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 TEX38Q6PEX7 206 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF502Q8TBZ5 544 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 BSCL2Q96G97 398 aaPredicted RBP8.17□□□□□ -1.1
VPS33A-204ENST00000540669 USMG5Q96IX5 58 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 GGACTQ9BVM4 153 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
VPS33A-204ENST00000540669 HSPB11Q9Y547 144 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 PKD1L1Q8TDX9 2849 aa8.17□□□□□ -1.1
VPS33A-204ENST00000540669 IGKV1OR2-108A0A075B7D4 117 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 L7N2F9 121 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 OR2J3O76001 311 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 MT-CO2P00403 227 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 IFNA10P01566 189 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 RLN2P04090 185 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms