RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 FSTL3O95633 263 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 PLA2G5P39877 138 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 OXLD1Q5BKU9 147 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 UNQ5815/PRO19632Q6UWF5 114 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 TMEM183AQ8IXX5 376 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 OR4A16Q8NH70 328 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 FAM213BQ8TBF2 198 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 SFRP2Q96HF1 295 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 OR4C12Q96R67 309 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 MIEN1Q9BRT3 115 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 TNFRSF18Q9Y5U5 241 aa7.89□□□□□ -1.15
CLIP1-212ENST00000540304 SPTAN1Q13813 2472 aaKnown RBP7.88□□□□□ -1.15
CLIP1-212ENST00000540304 TET2Q6N021 2002 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-212ENST00000540304 PSG1P11464 419 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 ELLP55199 621 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-212ENST00000540304 SLC38A11Q08AI6 406 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 MMDQ15546 238 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 VKORC1L1Q8N0U8 176 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 DPF1Q92782 380 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 URGCP-MRPS24S4R325 110 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 LYNX1G3V0Z9 82 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 CORTO00230 105 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 SIVA1O15304 175 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 LYNX1P0DP58 116 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 COL8A2P25067 703 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 RHEBQ15382 184 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 TMEM249Q2WGJ8 235 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 TMEM155Q4W5P6 130 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 ZNF833PQ6ZTB9 187 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 ZNF738Q8NE65 137 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 OR52E5Q8NH55 327 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 PITPNC1Q9UKF7 332 aa7.88□□□□□ -1.15
CLIP1-212ENST00000540304 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 CT45A6P0DMU7 189 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 CT45A5P0DMU8 189 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 CT45A7P0DMV0 189 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 SNCAP37840 140 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 DLX6P56179 175 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 RELBQ01201 579 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 PDLIM3Q53GG5 364 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-212ENST00000540304 DPPA3Q6W0C5 159 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 C8orf31Q8N9H6 132 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 TRBV7-9A0A0J9YWB2 115 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 SCGB1D1O95968 90 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 HRASP01112 189 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 RAB31Q13636 194 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 ELOBQ15370 118 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 RTL8BQ17RB0 113 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 ZNF429Q86V71 674 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 LFNGQ8NES3 379 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 FAM110AQ9BQ89 295 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 PSMG3Q9BT73 122 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-212ENST00000540304 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
CLIP1-212ENST00000540304 CFAP46Q8IYW2 2715 aa7.87□□□□□ -1.15
CLIP1-212ENST00000540304 TRAV30A0A087WSZ9 112 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 UBE2L5PA0A1B0GUS4 154 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 PMS2P5A8MQ11 134 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 OR4A47Q6IF82 309 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 LINC00311Q8N616 119 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 OR10P1Q8NGE3 313 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 TMEM147Q9BVK8 224 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 TNCP24821 2201 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 CACNA1AO00555 2505 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 TRAV3A0A0B4J244 114 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 C15orf61A6NNL5 157 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 GNLYP22749 145 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 UQCRFS1P47985 274 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 BSXQ3C1V8 233 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 C11orf71Q6IPW1 123 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 FAM71F2Q6NXP2 309 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 OR1N2Q8NGR9 330 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 RSG1Q9BU20 258 aa7.86□□□□□ -1.15
CLIP1-212ENST00000540304 FBLL1A6NHQ2 334 aaKnown RBP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 J3QR06 171 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 CNIH1O95406 144 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 CKS1BP61024 79 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 GNB2P62879 340 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 ERASQ7Z444 233 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 ITLN2Q8WWU7 325 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 TAF15Q92804 592 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 PBDC1Q9BVG4 233 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 FOXA2Q9Y261 457 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 ARHGAP32A7KAX9 2087 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 C15orf62A8K5M9 175 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 APOA2P02652 100 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 IGHV1-8P0DP01 117 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 VDAC2P45880 294 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-212ENST00000540304 SERF2P84101 59 aa7.85□□□□□ -1.15
CLIP1-212ENST00000540304 PRB3Q04118 309 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms