RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CXorf1O96002 111 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 GATA3P23771 443 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 GNB1P62873 340 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 SSX7Q7RTT5 188 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 Q8N6K4 173 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
LTBR-207ENST00000539925 TEX22C9J3V5 150 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 NPFFO15130 113 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 CRYGCP07315 174 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 FGF8P55075 233 aaPredicted RBP13.7□□□□□ -0.22
LTBR-207ENST00000539925 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.22
LTBR-207ENST00000539925 RHEBQ15382 184 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 SSMEM1Q8WWF3 244 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 ZNF462Q96JM2 2506 aa13.7□□□□□ -0.22
LTBR-207ENST00000539925 TMEM250H0YL14 139 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 FBP1P09467 338 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 STAG3L2P0CL84 134 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 STAG3L3P0CL85 134 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 OR10J1P30954 320 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 ATRAIDQ6UW56 229 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
LTBR-207ENST00000539925 A0A1W2PRD5 423 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 A0A1W2PRF3 423 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 A0A1W2PRM7 423 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 LINC00869P0C866 280 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 TMEM11P17152 192 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 TAS2R45P59539 299 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 MEF2BQ02080 365 aaPredicted RBP13.69□□□□□ -0.22
LTBR-207ENST00000539925 CYP2G1PQ6ZSU1 146 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 PERPQ96FX8 193 aa13.69□□□□□ -0.22
LTBR-207ENST00000539925 MRPL32Q9BYC8 188 aaKnown RBP13.69□□□□□ -0.22
LTBR-207ENST00000539925 B4DSR2 109 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 SAA4P35542 130 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 FXYD3Q14802 87 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 FAM74A3Q4VXF1 159 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 OR1L4Q8NGR5 311 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 ACY3Q96HD9 319 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 PFDN5Q99471 154 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 NIPSNAP3BQ9BS92 247 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 ARL2-SNX15V9GYD0 113 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 ARHGAP32A7KAX9 2087 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
LTBR-207ENST00000539925 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 MSMBP08118 114 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 AREGP15514 252 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 PNRC1Q12796 327 aaPredicted RBP13.67□□□□□ -0.22
LTBR-207ENST00000539925 MISP3Q96FF7 219 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 TRGV9Q99603 122 aa13.67□□□□□ -0.22
LTBR-207ENST00000539925 FNDC4Q9H6D8 234 aaPredicted RBP13.67□□□□□ -0.22
LTBR-207ENST00000539925 BEX4Q9NWD9 120 aaPredicted RBP13.67□□□□□ -0.22
LTBR-207ENST00000539925 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
LTBR-207ENST00000539925 TRAV20A0A0B4J274 112 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 FCN1O00602 326 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 CLN5O75503 358 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 NPBWR1P48145 328 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 BPIFB3P59826 476 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 CYB561D1Q8N8Q1 229 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 TECRQ9NZ01 308 aaKnown RBP13.66□□□□□ -0.22
LTBR-207ENST00000539925 FUT9Q9Y231 359 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 IGKV1OR2-108A0A075B7D4 117 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 NCBP2LA6PVI3 153 aaKnown RBP13.66□□□□□ -0.22
LTBR-207ENST00000539925 NPIPB5A8MRT5 1133 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 B4DEV8 164 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 M0R036 132 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 DNASE2O00115 360 aaPredicted RBP13.66□□□□□ -0.22
LTBR-207ENST00000539925 PDE6DO43924 150 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 IGHV1-69P01742 117 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 FABP1P07148 127 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 OR5G3P0C626 314 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 CTRB1P17538 263 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 SSBP2P81877 361 aaPredicted RBP13.66□□□□□ -0.22
LTBR-207ENST00000539925 CLEC12BQ2HXU8 276 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 CTRB2Q6GPI1 263 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 PQLC2Q6ZP29 291 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 DYNAPQ8N1N2 210 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 OR2T6Q8NHC8 308 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 ARPC1AQ92747 370 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 SMCO4Q9NRQ5 59 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
LTBR-207ENST00000539925 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 REG1AP05451 166 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 DEFA4P12838 97 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 RND2P52198 227 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 TVP23CQ96ET8 276 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 PRELID1Q9Y255 219 aa13.65□□□□□ -0.22
LTBR-207ENST00000539925 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms