RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 Q8N976 141 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 OCC1Q8TAD7 63 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 CORO2AQ92828 525 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 POM121L2Q96KW2 1035 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 ALKBH3Q96Q83 286 aaPredicted RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 HSD17B10Q99714 261 aaKnown RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 C19orf24Q9BVV8 132 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 DEFB127Q9H1M4 99 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 C1RLQ9NZP8 487 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 SLC25A10Q9UBX3 287 aaPredicted RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 PPP1R3CQ9UQK1 317 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 POLDIP2Q9Y2S7 368 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 RBM7Q9Y580 266 aaKnown RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 ODAMA1E959 279 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 PINLYPA6NC86 204 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 AHRRA9YTQ3 701 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 SIRPB1O00241 398 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 SYNGR1O43759 233 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 SERF1AO75920 110 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 NXPH3O95157 252 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 HLA-DQA1P01909 254 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 P04436 131 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 SELEP16581 610 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 CEACAM8P31997 349 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 MAGEA5P43359 124 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 REG1BP48304 166 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 ARF1P84077 181 aaKnown RBP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 PLP2Q04941 152 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 IZUMO4Q1ZYL8 232 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 RPEL1Q2QD12 228 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 TRAT1Q6PIZ9 186 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 PET117Q6UWS5 81 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 C11orf42Q8N5U0 333 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 OR10D3Q8NH80 312 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 OR1L1Q8NH94 360 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 WIPF2Q8TF74 440 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 GATAD1Q8WUU5 269 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 SAMD10Q9BYL1 202 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 PATZ1Q9HBE1 687 aaKnown RBP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 BET1LQ9NYM9 111 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 OR1A1Q9P1Q5 309 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 TRAPPC2LQ9UL33 140 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 BOKQ9UMX3 212 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-204ENST00000539847 LAMTOR2Q9Y2Q5 125 aa6.3□□□□□ -1.4
CCDC60-204ENST00000539847 EXPH5Q8NEV8 1989 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 HRNRQ86YZ3 2850 aaPredicted RBP6.29□□□□□ -1.4
CCDC60-204ENST00000539847 TRGV5A0A0B4J1U4 118 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 TMEM30CPA0ZSE6 113 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 OOEPA6NGQ2 149 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 C15orf62A8K5M9 175 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 FCN1O00602 326 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 ISLRO14498 428 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 CXCL13O43927 109 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 MRPL33O75394 65 aaKnown RBP6.29□□□□□ -1.4
CCDC60-204ENST00000539847 PATE4P0C8F1 98 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 WNT5AP41221 380 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 SELENOVP59797 346 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 UBE2G2P60604 165 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 RAB31Q13636 194 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 COTL1Q14019 142 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 GABRA6Q16445 453 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 CLEC12BQ2HXU8 276 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 SPATA46Q5T0L3 261 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 LRP11Q86VZ4 500 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 SCCPDHQ8NBX0 429 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF738Q8NE65 137 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 WFDC11Q8NEX6 87 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 OR4P4Q8NGL7 312 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 MRGPRDQ8TDS7 321 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 VN1R17PQ8TDU5 208 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 GALMQ96C23 342 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 RTL8AQ9BWD3 113 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 NPVFQ9HCQ7 196 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 DNAJC4Q9NNZ3 241 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 NRN1Q9NPD7 142 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 TUBG2Q9NRH3 451 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 TMEM167BQ9NRX6 74 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 SLC35D1Q9NTN3 355 aa6.29□□□□□ -1.4
CCDC60-204ENST00000539847 IGHV2-26A0A0B4J1V2 119 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 A0A0G2JMM0 328 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 A0A1W2PPB8 328 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 A0A1W2PRS3 328 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 DPRXA6NFQ7 191 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 KIR3DP1A8MWS1 328 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 J3QR06 171 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 IFNL4K9M1U5 179 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 HMGB3O15347 200 aaKnown RBP6.28□□□□□ -1.4
CCDC60-204ENST00000539847 HYPMO75409 117 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-204ENST00000539847 S1PR2O95136 353 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 OR2H2O95918 312 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 ADH4P08319 380 aa6.28□□□□□ -1.4
CCDC60-204ENST00000539847 LINC00869P0C866 280 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms