RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FKBP11Q9NYL4 201 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 OR9G9P0C7N8 305 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 P0C879 139 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 HLA-GP17693 338 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 RELBQ01201 579 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 FXYD3Q14802 87 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 FOXRED2Q8IWF2 684 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 OR4F5Q8NH21 305 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 ABHD5Q8WTS1 349 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
DDB1-216ENST00000539739 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 A0A1W2PN81 502 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 A0A1W2PPQ1 181 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 CHRNA7P36544 502 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 VDAC2P45880 294 aaPredicted RBP12.19□□□□□ -0.46
DDB1-216ENST00000539739 PPT1P50897 306 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 Q6ZS46 218 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 ARPC1AQ92747 370 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 C16orf95Q9H693 158 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 NF1P21359 2839 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 C15orf61A6NNL5 157 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
DDB1-216ENST00000539739 COMPP49747 757 aaPredicted RBP12.19□□□□□ -0.46
DDB1-216ENST00000539739 OR2F1Q13607 317 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 NMSQ5H8A3 153 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
DDB1-216ENST00000539739 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
DDB1-216ENST00000539739 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 OR51B2Q9Y5P1 312 aa12.19□□□□□ -0.46
DDB1-216ENST00000539739 TNCP24821 2201 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 A0A1B0GU03 582 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 ADAP1O75689 374 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 ADCYAP1P18509 176 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 OR2B8PP59922 312 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 TMEM267Q0VDI3 215 aaPredicted RBP12.18□□□□□ -0.46
DDB1-216ENST00000539739 USF2Q15853 346 aaPredicted RBP12.18□□□□□ -0.46
DDB1-216ENST00000539739 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.18□□□□□ -0.46
DDB1-216ENST00000539739 OR1L8Q8NGR8 309 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 SRSF12Q8WXF0 261 aaKnown RBP12.18□□□□□ -0.46
DDB1-216ENST00000539739 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDB1-216ENST00000539739 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
DDB1-216ENST00000539739 FOXA2Q9Y261 457 aaPredicted RBP12.18□□□□□ -0.46
DDB1-216ENST00000539739 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 A0A1B0GUS0 222 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 ATP6V0E1O15342 81 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 ARPC5O15511 151 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 SLC25A6P12236 298 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 NPBWR1P48145 328 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 NDPQ00604 133 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 FOXL1Q12952 345 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 Q6ZRM9 215 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 HSD17B11Q8NBQ5 300 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 OR5T1Q8NG75 326 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 ZNF257Q9Y2Q1 563 aa12.17□□□□□ -0.46
DDB1-216ENST00000539739 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 KANTRA0A1W2PQU2 76 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 MSGN1A6NI15 193 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 OPN1MWP04001 364 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 IGF1P05019 195 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 G0S2P27469 103 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 SSBP2P81877 361 aaPredicted RBP12.16□□□□□ -0.46
DDB1-216ENST00000539739 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 LINC01006Q8NI28 216 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 TMEM158Q8WZ71 300 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 FAM103A1Q9BTL3 118 aaKnown RBP12.16□□□□□ -0.46
DDB1-216ENST00000539739 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
DDB1-216ENST00000539739 MFFQ9GZY8 342 aa12.16□□□□□ -0.46
DDB1-216ENST00000539739 CLPSL1A2RUU4 121 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 RAB5AP20339 215 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 CDKN1BP46527 198 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 CRIP2P52943 208 aaPredicted RBP12.15□□□□□ -0.46
DDB1-216ENST00000539739 RIPPLY3P57055 190 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
DDB1-216ENST00000539739 HINT2Q9BX68 163 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 SERTAD4Q9NUC0 356 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 ATRQ13535 2644 aa12.15□□□□□ -0.46
DDB1-216ENST00000539739 C13orf42A0A1B0GVH6 325 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 C5orf51A6NDU8 294 aa12.15□□□□□ -0.47
DDB1-216ENST00000539739 ST8SIA3O43173 380 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms