RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 WDR81Q562E7 1941 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 K7ERU9 68 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
CACNB1-206ENST00000539338 TIMP3P35625 211 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 EFNA4P52798 201 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 ZNF324BQ6AW86 544 aaPredicted RBP12.13□□□□□ -0.47
CACNB1-206ENST00000539338 ARL17AQ8IVW1 177 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 KCNS1Q96KK3 526 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 B4DSR2 109 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 LINC00271P0C7V0 271 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 AREGP15514 252 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 RNF114Q9Y508 228 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 HOXA5P20719 270 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 TCF23Q7RTU1 214 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
CACNB1-206ENST00000539338 SPRR3Q9UBC9 169 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 LDLRAD4O15165 306 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 THBDP07204 575 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 FABP2P12104 132 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 MORN2Q502X0 79 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 HIST1H4GQ99525 98 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 LHFPL1Q86WI0 220 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 C14orf144Q96I85 54 aa12.12□□□□□ -0.47
CACNB1-206ENST00000539338 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
CACNB1-206ENST00000539338 PGPEP1LA6NFU8 196 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 GGNQ86UU5 652 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 NCOR1O75376 2440 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 C17orf100A8MU93 164 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 FAM106AQ4KMX7 169 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 RNASE7Q9H1E1 156 aaKnown RBP12.11□□□□□ -0.47
CACNB1-206ENST00000539338 DLX6P56179 175 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 GPR82Q96P67 336 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
CACNB1-206ENST00000539338 NDUFS8O00217 210 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 YPEL1O60688 119 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
CACNB1-206ENST00000539338 FAM90A1Q86YD7 464 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 SMIM12Q96EX1 92 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 TMEM70Q9BUB7 260 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
CACNB1-206ENST00000539338 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 NAPSAO96009 420 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 STAG3L2P0CL84 134 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.1□□□□□ -0.47
CACNB1-206ENST00000539338 MEF2CQ06413 473 aaPredicted RBP12.1□□□□□ -0.47
CACNB1-206ENST00000539338 MPDZO75970 2070 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 GBF1Q92538 1859 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 UPK2O00526 184 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 VWA8A3KMH1 1905 aa12.1□□□□□ -0.47
CACNB1-206ENST00000539338 GNG5P63218 68 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 GTF3AQ92664 365 aaKnown RBP12.09□□□□□ -0.47
CACNB1-206ENST00000539338 KLF2Q9Y5W3 355 aaPredicted RBP12.09□□□□□ -0.47
CACNB1-206ENST00000539338 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 LINC00587B1AMM8 73 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 A6NJY4 79 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 SNAI2O43623 268 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 C17orf82Q86X59 251 aaPredicted RBP12.09□□□□□ -0.47
CACNB1-206ENST00000539338 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 TRGV3P03979 118 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 RAB9AP51151 201 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 DDB2Q92466 427 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 SEMA5BQ9P283 1151 aa12.09□□□□□ -0.47
CACNB1-206ENST00000539338 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.47
CACNB1-206ENST00000539338 RFNGQ9Y644 331 aa12.08□□□□□ -0.47
CACNB1-206ENST00000539338 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
CACNB1-206ENST00000539338 GPR183P32249 361 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 PLP1P60201 277 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 LEMD1Q68G75 181 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms